RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.41
HOXA3-201ENST00000317201 IFIT2P09913 472 aaKnown RBP17.58■□□□□ 0.4
HOXA3-201ENST00000317201 HSCBQ8IWL3 235 aa17.58■□□□□ 0.4
HOXA3-201ENST00000317201 AK7Q96M32 723 aa17.58■□□□□ 0.4
HOXA3-201ENST00000317201 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
HOXA3-201ENST00000317201 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
HOXA3-201ENST00000317201 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
HOXA3-201ENST00000317201 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 MYH14Q7Z406 1995 aaKnown RBP17.57■□□□□ 0.4
HOXA3-201ENST00000317201 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 CIAO1O76071 339 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
HOXA3-201ENST00000317201 CSF1RP07333 972 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 LY75O60449 1722 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 TMX1Q9H3N1 280 aa17.57■□□□□ 0.4
HOXA3-201ENST00000317201 SLC20A2Q08357 652 aa17.56■□□□□ 0.4
HOXA3-201ENST00000317201 GPR108Q9NPR9 543 aa17.56■□□□□ 0.4
HOXA3-201ENST00000317201 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
HOXA3-201ENST00000317201 CAVIN1Q6NZI2 390 aaKnown RBP17.56■□□□□ 0.4
HOXA3-201ENST00000317201 SEPT12Q8IYM1 358 aa17.56■□□□□ 0.4
HOXA3-201ENST00000317201 BCCIPQ9P287 314 aaKnown RBP eCLIP17.56■□□□□ 0.4
HOXA3-201ENST00000317201 CAMTA2O94983 1202 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 REC8O95072 547 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 PARP10Q53GL7 1025 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 AACSQ86V21 672 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
HOXA3-201ENST00000317201 CLEC4GQ6UXB4 293 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 EAF2Q96CJ1 260 aaPredicted RBP17.55■□□□□ 0.4
HOXA3-201ENST00000317201 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
HOXA3-201ENST00000317201 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
HOXA3-201ENST00000317201 TSHZ3Q63HK5 1081 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 CNTROBQ8N137 903 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 PDLIM2Q96JY6 352 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 KIAA2012Q0VF49 1180 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 SIL1Q9H173 461 aa17.54■□□□□ 0.4
HOXA3-201ENST00000317201 SLFN14P0C7P3 912 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 CHMLP26374 656 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 MYH3P11055 1940 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
HOXA3-201ENST00000317201 CCDC66A2RUB6 948 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
HOXA3-201ENST00000317201 MMP14P50281 582 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 FAM193AP78312 1265 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 EYA2O00167 538 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 CCDC39Q9UFE4 941 aa17.52■□□□□ 0.4
HOXA3-201ENST00000317201 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.39
HOXA3-201ENST00000317201 SCN7AQ01118 1682 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
HOXA3-201ENST00000317201 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
HOXA3-201ENST00000317201 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
HOXA3-201ENST00000317201 CLGNO14967 610 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 PDE8AO60658 829 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 GPTP24298 496 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 SSFA2P28290 1259 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
HOXA3-201ENST00000317201 LAMB2P55268 1798 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 TFCP2Q12800 502 aa17.51■□□□□ 0.39
HOXA3-201ENST00000317201 IRS4O14654 1257 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-201ENST00000317201 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
HOXA3-201ENST00000317201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-201ENST00000317201 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
HOXA3-201ENST00000317201 TULP1O00294 542 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-201ENST00000317201 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
HOXA3-201ENST00000317201 CTSWP56202 376 aa17.5■□□□□ 0.39
HOXA3-201ENST00000317201 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
HOXA3-201ENST00000317201 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
HOXA3-201ENST00000317201 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
HOXA3-201ENST00000317201 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 PTF1AQ7RTS3 328 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 TTLL11Q8NHH1 800 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 SNX21Q969T3 373 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
HOXA3-201ENST00000317201 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 ATP5JP18859 108 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 MCM5P33992 734 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 PRIMPOLQ96LW4 560 aa17.49■□□□□ 0.39
HOXA3-201ENST00000317201 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
HOXA3-201ENST00000317201 KIF2CQ99661 725 aa17.48■□□□□ 0.39
HOXA3-201ENST00000317201 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
HOXA3-201ENST00000317201 RBM27Q9P2N5 1060 aaKnown RBP17.48■□□□□ 0.39
HOXA3-201ENST00000317201 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
HOXA3-201ENST00000317201 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
HOXA3-201ENST00000317201 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
HOXA3-201ENST00000317201 HIP1O00291 1037 aa17.47■□□□□ 0.39
HOXA3-201ENST00000317201 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
HOXA3-201ENST00000317201 LRP5O75197 1615 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms