RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SIK1P57059 783 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 PKP1Q13835 747 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 ZNF589Q86UQ0 364 aaPredicted RBP16.65■□□□□ 0.26
VAMP2-201ENST00000316509 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
VAMP2-201ENST00000316509 RPS6KB1P23443 525 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
VAMP2-201ENST00000316509 GOLIM4O00461 696 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 ITGA6P23229 1130 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 TTC39AQ5SRH9 613 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
VAMP2-201ENST00000316509 DDX46Q7L014 1031 aaKnown RBP16.64■□□□□ 0.25
VAMP2-201ENST00000316509 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
VAMP2-201ENST00000316509 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
VAMP2-201ENST00000316509 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
VAMP2-201ENST00000316509 GPTP24298 496 aa16.63■□□□□ 0.25
VAMP2-201ENST00000316509 VPS72Q15906 364 aa16.63■□□□□ 0.25
VAMP2-201ENST00000316509 LDHAL6AQ6ZMR3 332 aa16.63■□□□□ 0.25
VAMP2-201ENST00000316509 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
VAMP2-201ENST00000316509 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
VAMP2-201ENST00000316509 RREB1Q92766 1687 aa16.63■□□□□ 0.25
VAMP2-201ENST00000316509 GZF1Q9H116 711 aaPredicted RBP16.62■□□□□ 0.25
VAMP2-201ENST00000316509 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
VAMP2-201ENST00000316509 MBD3O95983 291 aa16.62■□□□□ 0.25
VAMP2-201ENST00000316509 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
VAMP2-201ENST00000316509 METTL24Q5JXM2 366 aa16.62■□□□□ 0.25
VAMP2-201ENST00000316509 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
VAMP2-201ENST00000316509 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
VAMP2-201ENST00000316509 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
VAMP2-201ENST00000316509 ZNF831Q5JPB2 1677 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 GREM2Q9H772 168 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
VAMP2-201ENST00000316509 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
VAMP2-201ENST00000316509 CLEC4GQ6UXB4 293 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 ZNF652Q9Y2D9 606 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 NUP98P52948 1817 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
VAMP2-201ENST00000316509 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
VAMP2-201ENST00000316509 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
VAMP2-201ENST00000316509 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 STX6O43752 255 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 PDE8BO95263 885 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 PDCP20941 246 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
VAMP2-201ENST00000316509 CPA1P15085 419 aa16.58■□□□□ 0.25
VAMP2-201ENST00000316509 ZNF445P59923 1031 aa16.58■□□□□ 0.25
VAMP2-201ENST00000316509 ME3Q16798 604 aa16.58■□□□□ 0.25
VAMP2-201ENST00000316509 KLHL34Q8N239 644 aa16.58■□□□□ 0.25
VAMP2-201ENST00000316509 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.25
VAMP2-201ENST00000316509 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.25
VAMP2-201ENST00000316509 RIC1Q4ADV7 1423 aa16.58■□□□□ 0.24
VAMP2-201ENST00000316509 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
VAMP2-201ENST00000316509 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
VAMP2-201ENST00000316509 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
VAMP2-201ENST00000316509 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
VAMP2-201ENST00000316509 TPCN1Q9ULQ1 816 aa16.58■□□□□ 0.24
VAMP2-201ENST00000316509 NDUFB9Q9Y6M9 179 aa16.58■□□□□ 0.24
VAMP2-201ENST00000316509 SYT1P21579 422 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 ITPK1Q13572 414 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 LPIN2Q92539 896 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
VAMP2-201ENST00000316509 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 CYP21A2P08686 494 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
VAMP2-201ENST00000316509 GJB2P29033 226 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 ADORA1P30542 326 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
VAMP2-201ENST00000316509 APPBP2Q92624 585 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
VAMP2-201ENST00000316509 MYH3P11055 1940 aa16.56■□□□□ 0.24
VAMP2-201ENST00000316509 HSPD1P10809 573 aaKnown RBP16.56■□□□□ 0.24
VAMP2-201ENST00000316509 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
VAMP2-201ENST00000316509 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
VAMP2-201ENST00000316509 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
VAMP2-201ENST00000316509 DHX32Q7L7V1 743 aaKnown RBP16.56■□□□□ 0.24
VAMP2-201ENST00000316509 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
VAMP2-201ENST00000316509 LARGE1O95461 756 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
VAMP2-201ENST00000316509 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
VAMP2-201ENST00000316509 MAST3O60307 1309 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 LRP5O75197 1615 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 F13A1P00488 732 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 FGFR2P21802 821 aa16.55■□□□□ 0.24
VAMP2-201ENST00000316509 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
VAMP2-201ENST00000316509 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
VAMP2-201ENST00000316509 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms