RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ANXA1P04083 346 aa15.63■□□□□ 0.09
SMIM4-201ENST00000307106 PDIA6Q15084 440 aa15.63■□□□□ 0.09
SMIM4-201ENST00000307106 NOM1Q5C9Z4 860 aaKnown RBP15.63■□□□□ 0.09
SMIM4-201ENST00000307106 EYA3Q99504 573 aa15.63■□□□□ 0.09
SMIM4-201ENST00000307106 CENPFP49454 3210 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 ZNF646O15015 1829 aaPredicted RBP15.62■□□□□ 0.09
SMIM4-201ENST00000307106 NEFMP07197 916 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 VIL1P09327 827 aaKnown RBP15.62■□□□□ 0.09
SMIM4-201ENST00000307106 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
SMIM4-201ENST00000307106 GPSM2P81274 684 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 SCARF1Q14162 830 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 MOB2Q70IA6 237 aa15.62■□□□□ 0.09
SMIM4-201ENST00000307106 CELF1Q92879 486 aaKnown RBP15.62■□□□□ 0.09
SMIM4-201ENST00000307106 TM4SF4P48230 202 aa15.61■□□□□ 0.09
SMIM4-201ENST00000307106 ZNF609O15014 1411 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 SPEF2Q9C093 1822 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 UBE2Q2LH0YL09 131 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 FKTNO75072 461 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 ZNF280AP59817 542 aaPredicted RBP15.6■□□□□ 0.09
SMIM4-201ENST00000307106 TCIRG1Q13488 830 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 PITPNM2Q9BZ72 1349 aa15.6■□□□□ 0.09
SMIM4-201ENST00000307106 G3V3G9 751 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 FXR1P51114 621 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMIM4-201ENST00000307106 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
SMIM4-201ENST00000307106 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 ZC3H12CQ9C0D7 883 aaKnown RBP15.59■□□□□ 0.09
SMIM4-201ENST00000307106 HTTP42858 3142 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 BRCA2P51587 3418 aa15.59■□□□□ 0.09
SMIM4-201ENST00000307106 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
SMIM4-201ENST00000307106 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
SMIM4-201ENST00000307106 AGBL3Q8NEM8 1001 aa15.58■□□□□ 0.08
SMIM4-201ENST00000307106 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
SMIM4-201ENST00000307106 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
SMIM4-201ENST00000307106 SCAF8Q9UPN6 1271 aaKnown RBP15.58■□□□□ 0.08
SMIM4-201ENST00000307106 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
SMIM4-201ENST00000307106 SREBF2Q12772 1141 aa15.57■□□□□ 0.08
SMIM4-201ENST00000307106 TTLL12Q14166 644 aaPredicted RBP15.57■□□□□ 0.08
SMIM4-201ENST00000307106 SF3B3Q15393 1217 aaKnown RBP15.57■□□□□ 0.08
SMIM4-201ENST00000307106 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
SMIM4-201ENST00000307106 CFHR5Q9BXR6 569 aa15.57■□□□□ 0.08
SMIM4-201ENST00000307106 MYOZ2Q9NPC6 264 aa15.57■□□□□ 0.08
SMIM4-201ENST00000307106 NFE2L2Q16236 605 aa15.56■□□□□ 0.08
SMIM4-201ENST00000307106 PRAMEF18Q5VWM3 479 aa15.56■□□□□ 0.08
SMIM4-201ENST00000307106 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
SMIM4-201ENST00000307106 R3HDMLQ9H3Y0 253 aa15.56■□□□□ 0.08
SMIM4-201ENST00000307106 MYH3P11055 1940 aa15.55■□□□□ 0.08
SMIM4-201ENST00000307106 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
SMIM4-201ENST00000307106 NECTIN2Q92692 538 aa15.55■□□□□ 0.08
SMIM4-201ENST00000307106 FAM89AQ96GI7 184 aa15.55■□□□□ 0.08
SMIM4-201ENST00000307106 TRIM17Q9Y577 477 aa15.55■□□□□ 0.08
SMIM4-201ENST00000307106 UFL1O94874 794 aa15.54■□□□□ 0.08
SMIM4-201ENST00000307106 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
SMIM4-201ENST00000307106 PLEKHF1Q96S99 279 aa15.54■□□□□ 0.08
SMIM4-201ENST00000307106 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
SMIM4-201ENST00000307106 NF2P35240 595 aa15.53■□□□□ 0.08
SMIM4-201ENST00000307106 GMLQ99445 158 aa15.53■□□□□ 0.08
SMIM4-201ENST00000307106 ANKIB1Q9P2G1 1089 aa15.53■□□□□ 0.08
SMIM4-201ENST00000307106 ALDH1A1P00352 501 aa15.52■□□□□ 0.08
SMIM4-201ENST00000307106 NBPF9Q3BBW0 867 aa15.52■□□□□ 0.08
SMIM4-201ENST00000307106 RTL5Q5HYW3 569 aaPredicted RBP15.52■□□□□ 0.08
SMIM4-201ENST00000307106 OTOP1Q7RTM1 612 aa15.52■□□□□ 0.08
SMIM4-201ENST00000307106 GGA1Q9UJY5 639 aa15.52■□□□□ 0.08
SMIM4-201ENST00000307106 PTPN12Q05209 780 aaKnown RBP15.51■□□□□ 0.07
SMIM4-201ENST00000307106 ISCA1Q9BUE6 129 aa15.51■□□□□ 0.07
SMIM4-201ENST00000307106 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 ATP5J2-PTCD1G3V325 749 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 IRS4O14654 1257 aaPredicted RBP15.5■□□□□ 0.07
SMIM4-201ENST00000307106 EN2P19622 333 aaPredicted RBP15.5■□□□□ 0.07
SMIM4-201ENST00000307106 ARMC9Q7Z3E5 817 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 PLBD2Q8NHP8 589 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 COLQQ9Y215 455 aaPredicted RBP15.5■□□□□ 0.07
SMIM4-201ENST00000307106 TRIOBPQ9H2D6 2365 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 SZT2Q5T011 3432 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 CEP290O15078 2479 aa15.5■□□□□ 0.07
SMIM4-201ENST00000307106 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 PRKG1Q13976 671 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 SPRYD7Q5W111 196 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 SEC31BQ9NQW1 1179 aa15.49■□□□□ 0.07
SMIM4-201ENST00000307106 WNT10BO00744 389 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 ANKRD13DQ6ZTN6 518 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 CHPF2Q9P2E5 772 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 PTPN22Q9Y2R2 807 aa15.48■□□□□ 0.07
SMIM4-201ENST00000307106 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 MANSC4A6NHS7 340 aaPredicted RBP15.47■□□□□ 0.07
SMIM4-201ENST00000307106 INHBEP58166 350 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 IFNL1Q8IU54 200 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 OGFOD1Q8N543 542 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 ARMC5Q96C12 935 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
SMIM4-201ENST00000307106 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
SMIM4-201ENST00000307106 ANGEL1Q9UNK9 670 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms