RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 KIF3AQ9Y496 699 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 SBF2Q86WG5 1849 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 A0A0G2JLW4 131 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 SMTNL1A8MU46 457 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 TAF5LO75529 589 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 HDGFL1Q5TGJ6 251 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 E4F1Q66K89 784 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 EVI5LQ96CN4 794 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 FEZ1Q99689 392 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 OSBPL5Q9H0X9 879 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 LGR6Q9HBX8 967 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 MAP4K4O95819 1239 aaPredicted RBP6.49□□□□□ -1.37
VPS50-202ENST00000305866 RPS6KB1P23443 525 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 KCNJ6P48051 423 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 ABTB2Q8N961 1025 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 MRFAP1L1Q96HT8 127 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
VPS50-202ENST00000305866 COL5A3P25940 1745 aaPredicted RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 COL16A1Q07092 1604 aaPredicted RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 AHDC1Q5TGY3 1603 aaPredicted RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 FAM237AA0A1B0GTK4 181 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 FDPSP14324 419 aaKnown RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 SLC20A2Q08357 652 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 TERF2Q15554 542 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 EPHA10Q5JZY3 1008 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 OGFRQ9NZT2 677 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 CHPF2Q9P2E5 772 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 NID2Q14112 1375 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 COL5A2P05997 1499 aaPredicted RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 LARP1Q6PKG0 1096 aaKnown RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 CNTROBQ8N137 903 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 GTF3C6Q969F1 213 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 SLC52A2Q9HAB3 445 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 RCOR1Q9UKL0 485 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 CASTP20810 708 aaKnown RBP6.48□□□□□ -1.37
VPS50-202ENST00000305866 CBX1P83916 185 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 CCDC83Q8IWF9 413 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 NECAB1Q8N987 351 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 BPIFA3Q9BQP9 254 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 ECHDC1Q9NTX5 307 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 FBXO3Q9UK99 471 aa6.48□□□□□ -1.37
VPS50-202ENST00000305866 SH3TC1Q8TE82 1336 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 DDX60LQ5H9U9 1706 aaKnown RBP6.47□□□□□ -1.37
VPS50-202ENST00000305866 CACNA1SQ13698 1873 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 PHKG2P15735 406 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 ATP5JP18859 108 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 PLA2G4AP47712 749 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 ARMCX5Q6P1M9 558 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 ST7Q9NRC1 585 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 INTS13Q9NVM9 706 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 HMG20BQ9P0W2 317 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 APBB1O00213 710 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 PHF14O94880 888 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 NMIQ13287 307 aaPredicted RBP6.47□□□□□ -1.37
VPS50-202ENST00000305866 FBXO38Q6PIJ6 1188 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
VPS50-202ENST00000305866 MED15Q96RN5 788 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
VPS50-202ENST00000305866 RBM8AQ9Y5S9 174 aaKnown RBP6.47□□□□□ -1.37
VPS50-202ENST00000305866 KIF13BQ9NQT8 1826 aa6.47□□□□□ -1.37
VPS50-202ENST00000305866 GABPB1Q06547 395 aaPredicted RBP6.46□□□□□ -1.37
VPS50-202ENST00000305866 ANO6Q4KMQ2 910 aa6.46□□□□□ -1.37
VPS50-202ENST00000305866 SUCLG2Q96I99 432 aa6.46□□□□□ -1.37
VPS50-202ENST00000305866 PLA2G12BQ9BX93 195 aa6.46□□□□□ -1.37
VPS50-202ENST00000305866 AXIN2Q9Y2T1 843 aa6.46□□□□□ -1.37
VPS50-202ENST00000305866 WDR19Q8NEZ3 1342 aa6.46□□□□□ -1.37
VPS50-202ENST00000305866 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 GRM8O00222 908 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.38
VPS50-202ENST00000305866 SCRN1Q12765 414 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 CCDC186Q7Z3E2 898 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 NBPF3Q9H094 633 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 C19orf44Q9H6X5 657 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 SPDYE4A6NLX3 237 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 NEURL1BA8MQ27 555 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 JAK2O60674 1132 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 CIAO1O76071 339 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 NSUN7Q8NE18 718 aaKnown RBP6.46□□□□□ -1.38
VPS50-202ENST00000305866 ZNF512BQ96KM6 892 aaPredicted RBP6.46□□□□□ -1.38
VPS50-202ENST00000305866 FTOQ9C0B1 505 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS50-202ENST00000305866 SENP3Q9H4L4 574 aaPredicted RBP6.46□□□□□ -1.38
VPS50-202ENST00000305866 DACT1Q9NYF0 836 aa6.46□□□□□ -1.38
VPS50-202ENST00000305866 SPATA31A3Q5VYP0 1347 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 PI4KAP2A4QPH2 592 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 H7C1W4 665 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 TBX2Q13207 712 aaPredicted RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 TRIM28Q13263 835 aaKnown RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 CWC27Q6UX04 472 aaKnown RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 CCAR2Q8N163 923 aaKnown RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 PI4KAP1Q8N8J0 262 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 ANKRD24Q8TF21 1146 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 RUFY2Q8WXA3 655 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 SYAP1Q96A49 352 aaPredicted RBP6.45□□□□□ -1.38
VPS50-202ENST00000305866 PDRG1Q9NUG6 133 aa6.45□□□□□ -1.38
VPS50-202ENST00000305866 PA2G4Q9UQ80 394 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms