RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 USP19O94966 1318 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
BRD3-201ENST00000303407 FGFR1OPO95684 399 aaKnown RBP18.84■□□□□ 0.61
BRD3-201ENST00000303407 APOBRQ0VD83 1088 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 RTN1Q16799 776 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
BRD3-201ENST00000303407 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 CCDC150Q8NCX0 1101 aa18.84■□□□□ 0.61
BRD3-201ENST00000303407 CGNQ9P2M7 1197 aaKnown RBP18.84■□□□□ 0.61
BRD3-201ENST00000303407 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.61
BRD3-201ENST00000303407 MATR3P43243 847 aaKnown RBP eCLIP18.83■□□□□ 0.61
BRD3-201ENST00000303407 IFIT1BQ5T764 474 aaKnown RBP18.83■□□□□ 0.61
BRD3-201ENST00000303407 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 FAM200AQ8TCP9 573 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 PYM1Q9BRP8 204 aaKnown RBP18.83■□□□□ 0.6
BRD3-201ENST00000303407 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 ARHGEF10O15013 1369 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 RFC4P35249 363 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 TNIP1Q15025 636 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 DDX21Q9NR30 783 aaKnown RBP eCLIP18.83■□□□□ 0.6
BRD3-201ENST00000303407 TCP11L1Q9NUJ3 509 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.6
BRD3-201ENST00000303407 CUL5Q93034 780 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 CALML4Q96GE6 196 aa18.83■□□□□ 0.6
BRD3-201ENST00000303407 SNW1Q13573 536 aaKnown RBP18.82■□□□□ 0.6
BRD3-201ENST00000303407 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
BRD3-201ENST00000303407 GSTO1P78417 241 aa18.82■□□□□ 0.6
BRD3-201ENST00000303407 ESR2Q92731 530 aa18.82■□□□□ 0.6
BRD3-201ENST00000303407 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
BRD3-201ENST00000303407 TSPYL1Q9H0U9 437 aa18.82■□□□□ 0.6
BRD3-201ENST00000303407 TMTC2Q8N394 836 aa18.82■□□□□ 0.6
BRD3-201ENST00000303407 CBX1P83916 185 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 CEP135Q66GS9 1140 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 DNAJC25Q9H1X3 360 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 GBP3Q9H0R5 595 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
BRD3-201ENST00000303407 CPA1P15085 419 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
BRD3-201ENST00000303407 AMPD3Q01432 767 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 JAKMIP3Q5VZ66 844 aa18.81■□□□□ 0.6
BRD3-201ENST00000303407 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
BRD3-201ENST00000303407 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
BRD3-201ENST00000303407 AOX1Q06278 1338 aa18.8■□□□□ 0.6
BRD3-201ENST00000303407 IRS4O14654 1257 aaPredicted RBP18.8■□□□□ 0.6
BRD3-201ENST00000303407 ZNF219Q9P2Y4 722 aaPredicted RBP18.8■□□□□ 0.6
BRD3-201ENST00000303407 RTL1A6NKG5 1358 aa18.8■□□□□ 0.6
BRD3-201ENST00000303407 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
BRD3-201ENST00000303407 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
BRD3-201ENST00000303407 ZNF790Q6PG37 636 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
BRD3-201ENST00000303407 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 AOPEPQ8N6M6 819 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 ERICH4A6NGS2 130 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 HOXB7P09629 217 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 ST5P78524 1137 aa18.79■□□□□ 0.6
BRD3-201ENST00000303407 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
BRD3-201ENST00000303407 UBA7P41226 1012 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 METTL22Q9BUU2 404 aaPredicted RBP18.78■□□□□ 0.6
BRD3-201ENST00000303407 HELLSQ9NRZ9 838 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 PNMA6EA0A0J9YXQ4 647 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 CLCN1P35523 988 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 UBASH3AP57075 661 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 TYRO3Q06418 890 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 AFMP43652 599 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 NEO1Q92859 1461 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 PREX2Q70Z35 1606 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
BRD3-201ENST00000303407 KIF20AO95235 890 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 ENOX2Q16206 610 aaKnown RBP18.77■□□□□ 0.6
BRD3-201ENST00000303407 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
BRD3-201ENST00000303407 RPS6KB1P23443 525 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 CFAP65Q6ZU64 1925 aaKnown RBP18.77■□□□□ 0.6
BRD3-201ENST00000303407 SPTLC2O15270 562 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
BRD3-201ENST00000303407 CCDC186Q7Z3E2 898 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 HELBQ8NG08 1087 aaPredicted RBP18.77■□□□□ 0.6
BRD3-201ENST00000303407 PLBD2Q8NHP8 589 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 PRIMPOLQ96LW4 560 aa18.77■□□□□ 0.6
BRD3-201ENST00000303407 SYT1P21579 422 aa18.77■□□□□ 0.59
BRD3-201ENST00000303407 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.59
BRD3-201ENST00000303407 GOLGA6L9A6NEM1 432 aa18.76■□□□□ 0.59
BRD3-201ENST00000303407 SLC27A2O14975 620 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms