RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 CALM2P0DP24 149 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 CALM3P0DP25 149 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 FAM114A2Q9NRY5 505 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 APOBRQ0VD83 1088 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 PPP2R5DQ14738 602 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 FRMD3A2A2Y4 597 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 SLU7O95391 586 aaKnown RBP14.06□□□□□ -0.16
ABCA3-201ENST00000301732 VIMP08670 466 aaKnown RBP14.06□□□□□ -0.16
ABCA3-201ENST00000301732 MCM7P33993 719 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 ASIC1P78348 528 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 CEP83Q9Y592 693 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 CCDC196A0A1B0GTZ2 297 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 ZPR1O75312 459 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 CLCN1P35523 988 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 LDHAL6AQ6ZMR3 332 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 PRIMPOLQ96LW4 560 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 TSNARE1Q96NA8 513 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
ABCA3-201ENST00000301732 TYRO3Q06418 890 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 TMEM87AQ8NBN3 555 aa14.06□□□□□ -0.16
ABCA3-201ENST00000301732 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 ACTN2P35609 894 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 CCDC94Q9BW85 323 aaPredicted RBP14.05□□□□□ -0.16
ABCA3-201ENST00000301732 STARD3NLO95772 234 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 SLC5A1P13866 664 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 RAPGEF1Q13905 1077 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 CLSTN2Q9H4D0 955 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 RAB34Q9BZG1 259 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 RBM8AQ9Y5S9 174 aaKnown RBP14.05□□□□□ -0.16
ABCA3-201ENST00000301732 MIGA1Q8NAN2 632 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 TACO1Q9BSH4 297 aaKnown RBP14.05□□□□□ -0.16
ABCA3-201ENST00000301732 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
ABCA3-201ENST00000301732 RAPGEF3O95398 923 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 PPP1R21Q6ZMI0 780 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 HELBQ8NG08 1087 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-201ENST00000301732 MBIPQ9NS73 344 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 TTC36A6NLP5 189 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-201ENST00000301732 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 EBAG9O00559 213 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 NEMFO60524 1076 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 NKTRP30414 1462 aaKnown RBP14.04□□□□□ -0.16
ABCA3-201ENST00000301732 RASA3Q14644 834 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 CCDC174Q6PII3 467 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 GBP6Q6ZN66 633 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 RAB3IL1Q8TBN0 382 aa14.04□□□□□ -0.16
ABCA3-201ENST00000301732 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
ABCA3-201ENST00000301732 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 ANKRD18BA2A2Z9 1011 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 HARSP12081 509 aaKnown RBP14.03□□□□□ -0.16
ABCA3-201ENST00000301732 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
ABCA3-201ENST00000301732 ELF2Q15723 593 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 KRT24Q2M2I5 525 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 CETN1Q12798 172 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
ABCA3-201ENST00000301732 NDC80O14777 642 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
ABCA3-201ENST00000301732 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.16
ABCA3-201ENST00000301732 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.16
ABCA3-201ENST00000301732 FOXO3O43524 673 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 TBC1D5Q92609 795 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 VPS16Q9H269 839 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 HMGB1P09429 215 aaKnown RBP14.02□□□□□ -0.17
ABCA3-201ENST00000301732 EVCP57679 992 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 WTAPQ15007 396 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 PPP1R7Q15435 360 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 UTP14CQ5TAP6 766 aaKnown RBP14.02□□□□□ -0.17
ABCA3-201ENST00000301732 MAEAQ7L5Y9 396 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.17
ABCA3-201ENST00000301732 MGARPQ8TDB4 240 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 SLC4A4Q9Y6R1 1079 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 ZWINTO95229 277 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 KRT9P35527 623 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 AMPD3Q01432 767 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 IFIT1BQ5T764 474 aaKnown RBP14.02□□□□□ -0.17
ABCA3-201ENST00000301732 ANKS4BQ8N8V4 417 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 PHAXQ9H814 394 aaKnown RBP14.02□□□□□ -0.17
ABCA3-201ENST00000301732 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
ABCA3-201ENST00000301732 F13A1P00488 732 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 PPP2R3AQ06190 1150 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 SMC6Q96SB8 1091 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 CYLC1P35663 651 aaPredicted RBP14.01□□□□□ -0.17
ABCA3-201ENST00000301732 CHRNA2Q15822 529 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 NBPF11Q86T75 865 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 FMNL3Q8IVF7 1028 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms