RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CARD6Q9BX69 1037 aa17.1■□□□□ 0.33
COL6A2-201ENST00000300527 GYS2P54840 703 aa17.1■□□□□ 0.33
COL6A2-201ENST00000300527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL6A2-201ENST00000300527 PNMA6AP0CW24 399 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-201ENST00000300527 TEX35Q5T0J7 233 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 CTAGE5O15320 804 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
COL6A2-201ENST00000300527 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ZSCAN16Q9H4T2 348 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ARGLU1Q9NWB6 273 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-201ENST00000300527 TAF5LO75529 589 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 MYL6BP14649 208 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 GSDMDP57764 484 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 SARM1Q6SZW1 724 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
COL6A2-201ENST00000300527 ERBB3P21860 1342 aa17.08■□□□□ 0.33
COL6A2-201ENST00000300527 CAVIN2O95810 425 aa17.08■□□□□ 0.33
COL6A2-201ENST00000300527 PDILTQ8N807 584 aa17.08■□□□□ 0.33
COL6A2-201ENST00000300527 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
COL6A2-201ENST00000300527 CERS3Q8IU89 383 aa17.08■□□□□ 0.32
COL6A2-201ENST00000300527 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
COL6A2-201ENST00000300527 CEP170BQ9Y4F5 1589 aaPredicted RBP17.08■□□□□ 0.32
COL6A2-201ENST00000300527 SERPINC1P01008 464 aa17.08■□□□□ 0.32
COL6A2-201ENST00000300527 HOXC9P31274 260 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
COL6A2-201ENST00000300527 CYP21A2P08686 494 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 NDUFA8P51970 172 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 TPM4P67936 248 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
COL6A2-201ENST00000300527 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 FHOD1Q9Y613 1164 aa17.07■□□□□ 0.32
COL6A2-201ENST00000300527 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 KCNB2Q92953 911 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 KIF2AO00139 706 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-201ENST00000300527 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
COL6A2-201ENST00000300527 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 CAPN2P17655 700 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 ST5P78524 1137 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
COL6A2-201ENST00000300527 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
COL6A2-201ENST00000300527 KRT32Q14532 448 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 KRBA2Q6ZNG9 492 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 GRM8O00222 908 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-201ENST00000300527 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 SLC3A2P08195 630 aaKnown RBP17.05■□□□□ 0.32
COL6A2-201ENST00000300527 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
COL6A2-201ENST00000300527 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-201ENST00000300527 RCOR1Q9UKL0 485 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 ADCY9O60503 1353 aa17.05■□□□□ 0.32
COL6A2-201ENST00000300527 USP6P35125 1406 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 EVCP57679 992 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
COL6A2-201ENST00000300527 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
COL6A2-201ENST00000300527 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 USP42Q9H9J4 1324 aaKnown RBP17.04■□□□□ 0.32
COL6A2-201ENST00000300527 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
COL6A2-201ENST00000300527 OAS2P29728 719 aaKnown RBP17.03■□□□□ 0.32
COL6A2-201ENST00000300527 CYP2C19P33261 490 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 HDGFP51858 240 aaKnown RBP17.03■□□□□ 0.32
COL6A2-201ENST00000300527 HAND2P61296 217 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 C10orf67Q8IYJ2 551 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 H2AFXP16104 143 aaPredicted RBP17.03■□□□□ 0.32
COL6A2-201ENST00000300527 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
COL6A2-201ENST00000300527 SKIDA1Q1XH10 827 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
COL6A2-201ENST00000300527 GNG11P61952 73 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 LMAN1P49257 510 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 ETF1P62495 437 aaKnown RBP17.02■□□□□ 0.32
COL6A2-201ENST00000300527 FANCCQ00597 558 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 TFCP2Q12800 502 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 SMARCE1Q969G3 411 aa17.02■□□□□ 0.32
COL6A2-201ENST00000300527 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
COL6A2-201ENST00000300527 DBNDD2Q9BQY9 259 aa17.02■□□□□ 0.31
COL6A2-201ENST00000300527 KIAA1468Q9P260 1216 aa17.02■□□□□ 0.31
COL6A2-201ENST00000300527 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.31
COL6A2-201ENST00000300527 NPHP4O75161 1426 aaPredicted RBP17.02■□□□□ 0.31
COL6A2-201ENST00000300527 UBASH3AP57075 661 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 RAD51AP2Q09MP3 1159 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 GOLIM4O00461 696 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 CTDNEP1O95476 244 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms