RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SLAIN2Q9P270 581 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 SERPINC1P01008 464 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 C8orf76Q96K31 380 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 CLSTN1O94985 981 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 ATP2B3Q16720 1220 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 UBAC1Q9BSL1 405 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 CPS1P31327 1500 aa23.16■■□□□ 1.3
CSPG5-201ENST00000264723 GOLGA8BA8MQT2 603 aa23.15■■□□□ 1.3
CSPG5-201ENST00000264723 MCMDC2Q4G0Z9 681 aa23.15■■□□□ 1.3
CSPG5-201ENST00000264723 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
CSPG5-201ENST00000264723 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
CSPG5-201ENST00000264723 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
CSPG5-201ENST00000264723 TMEM94Q12767 1356 aa23.15■■□□□ 1.3
CSPG5-201ENST00000264723 ATP6V1AP38606 617 aa23.14■■□□□ 1.3
CSPG5-201ENST00000264723 IL15P40933 162 aaPredicted RBP23.14■■□□□ 1.3
CSPG5-201ENST00000264723 LMTK2Q8IWU2 1503 aa23.14■■□□□ 1.29
CSPG5-201ENST00000264723 RXRAP19793 462 aa23.14■■□□□ 1.29
CSPG5-201ENST00000264723 TRIM22Q8IYM9 498 aa23.14■■□□□ 1.29
CSPG5-201ENST00000264723 PHKG2P15735 406 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 RPS6KB1P23443 525 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 TMX1Q9H3N1 280 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 AXIN2Q9Y2T1 843 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 ATP10DQ9P241 1426 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 CYP2E1P05181 493 aaPredicted RBP23.13■■□□□ 1.29
CSPG5-201ENST00000264723 SLFNL1Q499Z3 407 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 MICU3Q86XE3 530 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 PAG1Q9NWQ8 432 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 TTLL7Q6ZT98 887 aa23.13■■□□□ 1.29
CSPG5-201ENST00000264723 ORC3Q9UBD5 711 aaPredicted RBP23.13■■□□□ 1.29
CSPG5-201ENST00000264723 MAP3K12Q12852 859 aa23.12■■□□□ 1.29
CSPG5-201ENST00000264723 DDB1Q16531 1140 aa23.12■■□□□ 1.29
CSPG5-201ENST00000264723 ZNF589Q86UQ0 364 aaPredicted RBP23.12■■□□□ 1.29
CSPG5-201ENST00000264723 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
CSPG5-201ENST00000264723 ZBTB9Q96C00 473 aa23.12■■□□□ 1.29
CSPG5-201ENST00000264723 ATP2B2Q01814 1243 aa23.12■■□□□ 1.29
CSPG5-201ENST00000264723 ZPR1O75312 459 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 XBP1P17861 261 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 MARCKSP29966 332 aaPredicted RBP23.11■■□□□ 1.29
CSPG5-201ENST00000264723 LRMPQ12912 555 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 HMG20BQ9P0W2 317 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
CSPG5-201ENST00000264723 RGS12O14924 1447 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 CPSF1Q10570 1443 aaKnown RBP23.11■■□□□ 1.29
CSPG5-201ENST00000264723 PTPN14Q15678 1187 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 SLC9C2Q5TAH2 1124 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 MNS1Q8NEH6 495 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
CSPG5-201ENST00000264723 AOX1Q06278 1338 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 MYO3AQ8NEV4 1616 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 KLF18A0A0U1RQI7 1052 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 PTPDC1A2A3K4 754 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 SLC5A1P13866 664 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 TNNI3KQ59H18 835 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 FPGT-TNNI3KV9GXZ4 949 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 OLFM4Q6UX06 510 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
CSPG5-201ENST00000264723 PLBD2Q8NHP8 589 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
CSPG5-201ENST00000264723 LEO1Q8WVC0 666 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-201ENST00000264723 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
CSPG5-201ENST00000264723 NIP7Q9Y221 180 aaKnown RBP eCLIP23.09■■□□□ 1.29
CSPG5-201ENST00000264723 RANBP6O60518 1105 aaKnown RBP23.09■■□□□ 1.29
CSPG5-201ENST00000264723 CHGBP05060 677 aa23.09■■□□□ 1.29
CSPG5-201ENST00000264723 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
CSPG5-201ENST00000264723 CBX8Q9HC52 389 aa23.09■■□□□ 1.29
CSPG5-201ENST00000264723 KIAA1210Q9ULL0 1709 aa23.09■■□□□ 1.29
CSPG5-201ENST00000264723 COL3A1P02461 1466 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-201ENST00000264723 A0A1B0GUL7 405 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 A0A1B0GVL5 298 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 IRS4O14654 1257 aaPredicted RBP23.08■■□□□ 1.29
CSPG5-201ENST00000264723 IFIT3O14879 490 aaKnown RBP23.08■■□□□ 1.29
CSPG5-201ENST00000264723 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 KLHL34Q8N239 644 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 ZSWIM6Q9HCJ5 1215 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 ANO10Q9NW15 660 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 NR1I2O75469 434 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 SASH1O94885 1247 aa23.08■■□□□ 1.29
CSPG5-201ENST00000264723 ZNF500O60304 480 aaPredicted RBP23.08■■□□□ 1.28
CSPG5-201ENST00000264723 FTOQ9C0B1 505 aaKnown RBP eCLIP23.08■■□□□ 1.28
CSPG5-201ENST00000264723 HOOK1Q9UJC3 728 aaKnown RBP23.08■■□□□ 1.28
CSPG5-201ENST00000264723 VWDEQ8N2E2 1590 aa23.07■■□□□ 1.28
CSPG5-201ENST00000264723 CAVIN4Q5BKX8 364 aa23.07■■□□□ 1.28
CSPG5-201ENST00000264723 HMGB1P09429 215 aaKnown RBP23.07■■□□□ 1.28
CSPG5-201ENST00000264723 TMC6Q7Z403 805 aa23.07■■□□□ 1.28
CSPG5-201ENST00000264723 BRMS1Q9HCU9 246 aa23.06■■□□□ 1.28
CSPG5-201ENST00000264723 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
CSPG5-201ENST00000264723 PYCARDQ9ULZ3 195 aa23.06■■□□□ 1.28
CSPG5-201ENST00000264723 SKILP12757 684 aa23.06■■□□□ 1.28
CSPG5-201ENST00000264723 NRBP1Q9UHY1 535 aa23.06■■□□□ 1.28
CSPG5-201ENST00000264723 CRB1P82279 1406 aa23.05■■□□□ 1.28
CSPG5-201ENST00000264723 PRIMPOLQ96LW4 560 aa23.05■■□□□ 1.28
CSPG5-201ENST00000264723 ERBB3P21860 1342 aa23.05■■□□□ 1.28
CSPG5-201ENST00000264723 POLA2Q14181 598 aa23.05■■□□□ 1.28
CSPG5-201ENST00000264723 CLEC17AQ6ZS10 378 aa23.05■■□□□ 1.28
CSPG5-201ENST00000264723 PIK3C2BO00750 1634 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms