RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 HAUS7Q99871 368 aa22.9■■□□□ 1.26
TRIM47-201ENST00000254816 HELBQ8NG08 1087 aaPredicted RBP22.89■■□□□ 1.26
TRIM47-201ENST00000254816 NBPF5PQ86XG9 351 aaPredicted RBP22.89■■□□□ 1.25
TRIM47-201ENST00000254816 VGLL2Q8N8G2 317 aa22.89■■□□□ 1.25
TRIM47-201ENST00000254816 FAM227BQ96M60 508 aa22.89■■□□□ 1.25
TRIM47-201ENST00000254816 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
TRIM47-201ENST00000254816 ATP2B3Q16720 1220 aa22.88■■□□□ 1.25
TRIM47-201ENST00000254816 POTEAQ6S8J7 498 aa22.88■■□□□ 1.25
TRIM47-201ENST00000254816 NMIQ13287 307 aaPredicted RBP22.88■■□□□ 1.25
TRIM47-201ENST00000254816 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
TRIM47-201ENST00000254816 SPRYD3Q8NCJ5 442 aa22.88■■□□□ 1.25
TRIM47-201ENST00000254816 MPHOSPH8Q99549 860 aa22.88■■□□□ 1.25
TRIM47-201ENST00000254816 CD2BP2O95400 341 aaKnown RBP22.87■■□□□ 1.25
TRIM47-201ENST00000254816 APBA3O96018 575 aa22.87■■□□□ 1.25
TRIM47-201ENST00000254816 GORABQ5T7V8 394 aa22.87■■□□□ 1.25
TRIM47-201ENST00000254816 CHGBP05060 677 aa22.87■■□□□ 1.25
TRIM47-201ENST00000254816 NYXQ9GZU5 481 aa22.87■■□□□ 1.25
TRIM47-201ENST00000254816 PDE8BO95263 885 aa22.86■■□□□ 1.25
TRIM47-201ENST00000254816 IFIT1P09914 478 aaKnown RBP22.86■■□□□ 1.25
TRIM47-201ENST00000254816 PALD1Q9ULE6 856 aa22.86■■□□□ 1.25
TRIM47-201ENST00000254816 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
TRIM47-201ENST00000254816 GOLIM4O00461 696 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 TTC39AQ5SRH9 613 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 RUFY2Q8WXA3 655 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 LSG1Q9H089 658 aaKnown RBP22.85■■□□□ 1.25
TRIM47-201ENST00000254816 A0A0D9SFI3 127 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 TAF5LO75529 589 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 IGHMBP2P38935 993 aaKnown RBP22.85■■□□□ 1.25
TRIM47-201ENST00000254816 CCDC158Q5M9N0 1113 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 HSCBQ8IWL3 235 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 ANTXR1Q9H6X2 564 aa22.85■■□□□ 1.25
TRIM47-201ENST00000254816 SNAP23O00161 211 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 ADRA2BP18089 450 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 NFIXQ14938 502 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 SLC10A5Q5PT55 438 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 MROH5Q6ZUA9 1318 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 HIP1O00291 1037 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 SF3B3Q15393 1217 aaKnown RBP22.84■■□□□ 1.25
TRIM47-201ENST00000254816 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 SNRKQ9NRH2 765 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 PAG1Q9NWQ8 432 aa22.84■■□□□ 1.25
TRIM47-201ENST00000254816 ARAP2Q8WZ64 1704 aa22.83■■□□□ 1.25
TRIM47-201ENST00000254816 AKAP11Q9UKA4 1901 aa22.83■■□□□ 1.25
TRIM47-201ENST00000254816 TNRC6CQ9HCJ0 1690 aaKnown RBP22.83■■□□□ 1.25
TRIM47-201ENST00000254816 A0A1B0GUL6 1792 aa22.83■■□□□ 1.25
TRIM47-201ENST00000254816 TNS1Q9HBL0 1735 aaKnown RBP22.83■■□□□ 1.25
TRIM47-201ENST00000254816 SCARF1Q14162 830 aa22.83■■□□□ 1.24
TRIM47-201ENST00000254816 RABEP1Q15276 862 aa22.83■■□□□ 1.24
TRIM47-201ENST00000254816 KIAA1211Q6ZU35 1233 aa22.83■■□□□ 1.24
TRIM47-201ENST00000254816 SNX21Q969T3 373 aa22.83■■□□□ 1.24
TRIM47-201ENST00000254816 RAD50Q92878 1312 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 NPHP1O15259 732 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 MCCP23508 829 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 SSFA2P28290 1259 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 PTH1RQ03431 593 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 GYS1P13807 737 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 FKBP4Q02790 459 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRIM47-201ENST00000254816 GSE1Q14687 1217 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 FBXO41Q8TF61 875 aa22.82■■□□□ 1.24
TRIM47-201ENST00000254816 PLSCR1O15162 318 aa22.81■■□□□ 1.24
TRIM47-201ENST00000254816 SLFNL1Q499Z3 407 aa22.81■■□□□ 1.24
TRIM47-201ENST00000254816 KBTBD3Q8NAB2 608 aa22.81■■□□□ 1.24
TRIM47-201ENST00000254816 NLRP3Q96P20 1036 aa22.81■■□□□ 1.24
TRIM47-201ENST00000254816 CDC5LQ99459 802 aaKnown RBP22.81■■□□□ 1.24
TRIM47-201ENST00000254816 MYO5AQ9Y4I1 1855 aaKnown RBP22.81■■□□□ 1.24
TRIM47-201ENST00000254816 PUM3Q15397 648 aaKnown RBP22.8■■□□□ 1.24
TRIM47-201ENST00000254816 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
TRIM47-201ENST00000254816 PI16Q6UXB8 463 aa22.8■■□□□ 1.24
TRIM47-201ENST00000254816 CARMIL3Q8ND23 1372 aa22.8■■□□□ 1.24
TRIM47-201ENST00000254816 FGFR2P21802 821 aa22.8■■□□□ 1.24
TRIM47-201ENST00000254816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.8■■□□□ 1.24
TRIM47-201ENST00000254816 CELF1Q92879 486 aaKnown RBP22.8■■□□□ 1.24
TRIM47-201ENST00000254816 HSPA4P34932 840 aa22.79■■□□□ 1.24
TRIM47-201ENST00000254816 CHRNDQ07001 517 aa22.79■■□□□ 1.24
TRIM47-201ENST00000254816 ZNF589Q86UQ0 364 aaPredicted RBP22.79■■□□□ 1.24
TRIM47-201ENST00000254816 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
TRIM47-201ENST00000254816 SEC62Q99442 399 aaKnown RBP22.79■■□□□ 1.24
TRIM47-201ENST00000254816 LPIN2Q92539 896 aa22.79■■□□□ 1.24
TRIM47-201ENST00000254816 MYH7P12883 1935 aa22.78■■□□□ 1.24
TRIM47-201ENST00000254816 ZAP70P43403 619 aa22.78■■□□□ 1.24
TRIM47-201ENST00000254816 PHKA1P46020 1223 aa22.78■■□□□ 1.24
TRIM47-201ENST00000254816 TFCP2L1Q9NZI6 479 aa22.78■■□□□ 1.24
TRIM47-201ENST00000254816 CCDC171Q6TFL3 1326 aa22.77■■□□□ 1.24
TRIM47-201ENST00000254816 MED23Q9ULK4 1368 aa22.77■■□□□ 1.24
TRIM47-201ENST00000254816 EPB41L2O43491 1005 aaKnown RBP22.77■■□□□ 1.24
TRIM47-201ENST00000254816 MCAMP43121 646 aa22.77■■□□□ 1.24
TRIM47-201ENST00000254816 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
TRIM47-201ENST00000254816 CCDC102BQ68D86 513 aa22.77■■□□□ 1.23
TRIM47-201ENST00000254816 CCDC129Q6ZRS4 1044 aa22.77■■□□□ 1.23
TRIM47-201ENST00000254816 CNBD1Q8NA66 436 aa22.77■■□□□ 1.23
TRIM47-201ENST00000254816 SLC5A1P13866 664 aa22.76■■□□□ 1.23
TRIM47-201ENST00000254816 WTIPA6NIX2 430 aaPredicted RBP22.75■■□□□ 1.23
TRIM47-201ENST00000254816 K7ELQ4 463 aaPredicted RBP22.75■■□□□ 1.23
TRIM47-201ENST00000254816 ANAPC15P60006 121 aa22.75■■□□□ 1.23
TRIM47-201ENST00000254816 RASEFQ8IZ41 740 aa22.75■■□□□ 1.23
TRIM47-201ENST00000254816 AKT1S1Q96B36 256 aa22.75■■□□□ 1.23
TRIM47-201ENST00000254816 PRR5LQ6MZQ0 368 aa22.74■■□□□ 1.23
TRIM47-201ENST00000254816 BSDC1Q9NW68 430 aaPredicted RBP22.74■■□□□ 1.23
TRIM47-201ENST00000254816 SNX14Q9Y5W7 946 aa22.74■■□□□ 1.23
TRIM47-201ENST00000254816 NEK4P51957 841 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 325.6 ms