RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 IQGAP1P46940 1657 aa19.54■□□□□ 0.72
PTK7-202ENST00000230419 IL15P40933 162 aaPredicted RBP19.54■□□□□ 0.72
PTK7-202ENST00000230419 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
PTK7-202ENST00000230419 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
PTK7-202ENST00000230419 GOLGA8AA7E2F4 631 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
PTK7-202ENST00000230419 MAP3K12Q12852 859 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 A0A087WWV3 80 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 LUZP1Q86V48 1076 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 SASH1O94885 1247 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 HMGB1P09429 215 aaKnown RBP19.53■□□□□ 0.72
PTK7-202ENST00000230419 TMX1Q9H3N1 280 aa19.53■□□□□ 0.72
PTK7-202ENST00000230419 DBNLQ9UJU6 430 aaKnown RBP19.53■□□□□ 0.72
PTK7-202ENST00000230419 NIP7Q9Y221 180 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTK7-202ENST00000230419 TMEM67Q5HYA8 995 aa19.52■□□□□ 0.72
PTK7-202ENST00000230419 SLC12A7Q9Y666 1083 aa19.52■□□□□ 0.72
PTK7-202ENST00000230419 PIK3C2BO00750 1634 aa19.52■□□□□ 0.72
PTK7-202ENST00000230419 CYP27B1O15528 508 aa19.52■□□□□ 0.71
PTK7-202ENST00000230419 ZNF771Q7L3S4 317 aaPredicted RBP19.52■□□□□ 0.71
PTK7-202ENST00000230419 CCDC112Q8NEF3 446 aa19.52■□□□□ 0.71
PTK7-202ENST00000230419 ERBB3P21860 1342 aa19.52■□□□□ 0.71
PTK7-202ENST00000230419 SLC26A6Q9BXS9 759 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
PTK7-202ENST00000230419 C8orf37Q96NL8 207 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 TPCN1Q9ULQ1 816 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 CCDC186Q7Z3E2 898 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 PLBD2Q8NHP8 589 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
PTK7-202ENST00000230419 PTPDC1A2A3K4 754 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 CDKL5O76039 1030 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 DDX19AQ9NUU7 478 aaKnown RBP19.5■□□□□ 0.71
PTK7-202ENST00000230419 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 IGKV5-2P06315 115 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 ANKRD20A12PQ8NF67 263 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 EYA2O00167 538 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 PRC1O43663 620 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.71
PTK7-202ENST00000230419 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PTK7-202ENST00000230419 NCOA7Q8NI08 942 aa19.5■□□□□ 0.71
PTK7-202ENST00000230419 BRD1O95696 1058 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 ITGA6P23229 1130 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 ZAP70P43403 619 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 SLC5A1P13866 664 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 ADORA1P30542 326 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 MCM5P33992 734 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 IARSP41252 1262 aaKnown RBP19.49■□□□□ 0.71
PTK7-202ENST00000230419 XAGE2Q96GT9 111 aa19.49■□□□□ 0.71
PTK7-202ENST00000230419 FRMPD1Q5SYB0 1578 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 HOXB7P09629 217 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 IKQ13123 557 aaPredicted RBP19.48■□□□□ 0.71
PTK7-202ENST00000230419 TYRO3Q06418 890 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 DDB1Q16531 1140 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 ANKIB1Q9P2G1 1089 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 ZKSCAN5Q9Y2L8 839 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 PRDM1O75626 825 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 TRIM34Q9BYJ4 488 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 LSG1Q9H089 658 aaKnown RBP19.48■□□□□ 0.71
PTK7-202ENST00000230419 ANO10Q9NW15 660 aa19.48■□□□□ 0.71
PTK7-202ENST00000230419 LMTK2Q8IWU2 1503 aa19.47■□□□□ 0.71
PTK7-202ENST00000230419 RPS6KB1P23443 525 aa19.47■□□□□ 0.71
PTK7-202ENST00000230419 PI4K2BQ8TCG2 481 aa19.47■□□□□ 0.71
PTK7-202ENST00000230419 SLC3A2P08195 630 aaKnown RBP19.47■□□□□ 0.71
PTK7-202ENST00000230419 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
PTK7-202ENST00000230419 DHX32Q7L7V1 743 aaKnown RBP19.46■□□□□ 0.71
PTK7-202ENST00000230419 RNF113AO15541 343 aaKnown RBP19.46■□□□□ 0.71
PTK7-202ENST00000230419 MAGEB6Q8N7X4 407 aa19.46■□□□□ 0.71
PTK7-202ENST00000230419 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
PTK7-202ENST00000230419 IPO7O95373 1038 aaKnown RBP19.46■□□□□ 0.71
PTK7-202ENST00000230419 CPLX3Q8WVH0 158 aa19.46■□□□□ 0.71
PTK7-202ENST00000230419 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
PTK7-202ENST00000230419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTK7-202ENST00000230419 SETBP1Q9Y6X0 1596 aa19.46■□□□□ 0.7
PTK7-202ENST00000230419 B4E1Z4 1266 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 ALG1Q9BT22 464 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 A0A1B0GVL5 298 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 CMTR1Q8N1G2 835 aaKnown RBP19.45■□□□□ 0.7
PTK7-202ENST00000230419 BABAM1Q9NWV8 329 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 CD163L1Q9NR16 1453 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 FTOQ9C0B1 505 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTK7-202ENST00000230419 PTGS1P23219 599 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 CAVIN4Q5BKX8 364 aa19.45■□□□□ 0.7
PTK7-202ENST00000230419 TNNT1P13805 278 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 CNNM3Q8NE01 707 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 LAMC1P11047 1609 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 CYP7A1P22680 504 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 TMC6Q7Z403 805 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 PCDH11XQ9BZA7 1347 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 PCDH11YQ9BZA8 1340 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 ZPR1O75312 459 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTK7-202ENST00000230419 SPECC1Q5M775 1068 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 TSC1Q92574 1164 aa19.44■□□□□ 0.7
PTK7-202ENST00000230419 MFSD6Q6ZSS7 791 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms