RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 SPTLC2O15270 562 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 CPA1P15085 419 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
TRO-201ENST00000173898 DHX37Q8IY37 1157 aaKnown RBP13.79□□□□□ -0.2
TRO-201ENST00000173898 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 GCP02774 474 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 SYT1P21579 422 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
TRO-201ENST00000173898 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
TRO-201ENST00000173898 NBPF6Q5VWK0 638 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
TRO-201ENST00000173898 NBPF4Q96M43 638 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 CCDC113Q9H0I3 377 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 ZRSR2Q15696 482 aaKnown RBP13.78□□□□□ -0.2
TRO-201ENST00000173898 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 BMP15O95972 392 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 TFCP2Q12800 502 aa13.78□□□□□ -0.2
TRO-201ENST00000173898 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 AKR1B10O60218 316 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 DHX32Q7L7V1 743 aaKnown RBP13.77□□□□□ -0.2
TRO-201ENST00000173898 PLCD4Q9BRC7 762 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 DNAI1Q9UI46 699 aa13.77□□□□□ -0.2
TRO-201ENST00000173898 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
TRO-201ENST00000173898 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
TRO-201ENST00000173898 SHTN1A0MZ66 631 aa13.77□□□□□ -0.21
TRO-201ENST00000173898 TMCO5BA8MYB1 307 aa13.77□□□□□ -0.21
TRO-201ENST00000173898 HLTFQ14527 1009 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRO-201ENST00000173898 ALS2CR12Q96Q35 445 aa13.77□□□□□ -0.21
TRO-201ENST00000173898 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
TRO-201ENST00000173898 ARHGEF12Q9NZN5 1544 aa13.77□□□□□ -0.21
TRO-201ENST00000173898 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 USP8P40818 1118 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 RUFY3Q7L099 469 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 NAA16Q6N069 864 aaPredicted RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRO-201ENST00000173898 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 PZPP20742 1482 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 MACROD2A1Z1Q3 448 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 NOP2P46087 812 aaKnown RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 MSH6P52701 1360 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 MYO1BO43795 1136 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 HOXC9P31274 260 aa13.76□□□□□ -0.21
TRO-201ENST00000173898 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
TRO-201ENST00000173898 KDM2BQ8NHM5 1336 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 DESP17661 470 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 CETN1Q12798 172 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 SMARCC1Q92922 1105 aaPredicted RBP13.75□□□□□ -0.21
TRO-201ENST00000173898 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 IL13P35225 146 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 RFC4P35249 363 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 RMND1Q9NWS8 449 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRO-201ENST00000173898 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRO-201ENST00000173898 SPAG1Q07617 926 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
TRO-201ENST00000173898 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
TRO-201ENST00000173898 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
TRO-201ENST00000173898 RTL1A6NKG5 1358 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 CHL1O00533 1208 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 KCNA6P17658 529 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 GBP2P32456 591 aaPredicted RBP13.74□□□□□ -0.21
TRO-201ENST00000173898 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 STAT6P42226 847 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
TRO-201ENST00000173898 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 FEZ1Q99689 392 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 TIMM10P62072 90 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 DHX58Q96C10 678 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 RAD50Q92878 1312 aa13.74□□□□□ -0.21
TRO-201ENST00000173898 ABCC1P33527 1531 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 ITSN2Q9NZM3 1697 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 GNAQP50148 359 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
TRO-201ENST00000173898 CTNNBL1Q8WYA6 563 aaPredicted RBP13.73□□□□□ -0.21
TRO-201ENST00000173898 IP6K1Q92551 441 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 CTAGE1Q96RT6 745 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms