RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 EspnlQ3UYR4 1005 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Usp48Q3V0C5 1052 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Il1rapl2Q9ERS6 686 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Nol10Q5RJG1 687 aaKnown RBP8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 HellsQ60848 821 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Trim52Q8CDV4 233 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Pnma3Q8JZW8 466 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ubxn4Q8VCH8 506 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 TnmdQ9EP64 317 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Trip6Q9Z1Y4 480 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Zkscan16A2ALW2 728 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ccdc162pQ0VG85 912 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Arglu1Q3UL36 271 aaKnown RBP8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tshz3Q8CGV9 1081 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Gigyf1Q99MR1 1044 aaKnown RBP8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Riok3Q9DBU3 519 aaKnown RBP8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Eif3aP23116 1344 aaKnown RBP8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Timm10P62073 90 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Ift57Q8BXG3 429 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Taok3Q8BYC6 898 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Rbm33Q9CXK9 1231 aaKnown RBP8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Prr5lA2AVJ5 370 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 CebpzP53569 1052 aaKnown RBP8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Gnat3Q3V3I2 354 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Mns1Q61884 491 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 WdpcpQ8C456 722 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Lrit1Q8K099 624 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 CenpqQ9CPQ5 267 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Tktl2Q9D4D4 627 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Cntnap1O54991 1385 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Cyp2c23E9Q5K4 494 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 MecomP14404 1042 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Usp25P57080 1055 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Frmd3Q8BHD4 595 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Brf1Q8CFK2 676 aa8.83□□□□□ -1
Bdnf-203ENSMUST00000111043 Cyp7a1Q64505 503 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Ltv1Q6NSQ7 470 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 RestQ8VIG1 1082 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 NgdnQ9DB96 315 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Stx6Q9JKK1 255 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Slurp2P0DP59 97 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Kif2aP28740 705 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Pde4dQ01063 747 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Ifit1bl2Q3U687 466 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Babam1Q3UI43 333 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Gnl3lQ6PGG6 577 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Rab3gap1Q80UJ7 981 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 CrebrfQ8CDG5 640 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Popdc2Q9ES82 367 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Myo5bP21271 1818 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Gm13023A2A8N2 498 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Cnnm3Q32NY4 713 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Ercc6lQ8BHK9 1240 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Dis3l2Q8CI75 870 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Ncoa5Q91W39 579 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Fam213aQ9CYH2 218 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Q9D9S1 216 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Cwc15Q9JHS9 229 aaKnown RBP8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Igbp1bQ9QZ29 343 aa8.82□□□□□ -1
Bdnf-203ENSMUST00000111043 Spag5Q7TME2 1165 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 FocadA2AKG8 1798 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Mctp1E9PV86 951 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Paxbp1P58501 919 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Zfp51Q3U4L8 781 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Esco1Q69Z69 843 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Zfp397Q7TNK4 527 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Srp68Q8BMA6 625 aaKnown RBP8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Zkscan5Q9Z1D8 819 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Oas2E9Q9A9 742 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 AK157302I3ITR1 129 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Tlr8P58682 1032 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Nlrp9bQ66X22 1003 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Rbm42Q91V81 474 aaKnown RBP8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Isca1Q9D924 129 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Pes1Q9EQ61 584 aaKnown RBP8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Mapk8ip1Q9WVI9 707 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Tnks1bp1P58871 1720 aa8.81□□□□□ -1
Bdnf-203ENSMUST00000111043 Cops6O88545 324 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Ms4a1P19437 291 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Gjb2Q00977 226 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Snx13Q6PHS6 957 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 EngaseQ8BX80 734 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Smc4Q8CG47 1286 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Mylk2Q8VCR8 613 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Trim34aQ99PP6 485 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Dhx8A2A4P0 1244 aaKnown RBP8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Cyp19a1P28649 503 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Vps54Q5SPW0 977 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Mum1Q6DID5 682 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Cep135Q6P5D4 1140 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Cypt2Q6P924 180 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Pof1bQ8K4L4 587 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Krt85Q9Z2T6 507 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Chrm1P12657 460 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Zbtb38Q3LR78 1197 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Wdr93Q402B2 695 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Hook1Q8BIL5 728 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 InsrrQ9WTL4 1300 aa8.8□□□□□ -1
Bdnf-203ENSMUST00000111043 Ccer1Q9CQL2 403 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Lrp6O88572 1613 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms