RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Zbtb1Q91VL9 713 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Ppil4Q9CXG3 492 aaKnown RBP18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Zscan25B2RX31 543 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 TsksO54887 585 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Gpr182P43142 395 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Trim56Q80VI1 734 aaKnown RBP18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Jmjd4Q8BFT6 427 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Marf1Q8BJ34 1730 aaKnown RBP18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 CgnP59242 1191 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Esyt1Q3U7R1 1092 aaKnown RBP18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Pdcl3Q8BVF2 240 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Chd1lQ9CXF7 900 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Ccne2Q9Z238 404 aa18.43■□□□□ 0.54
Vcan-201ENSMUST00000109543 Arap2Q8BZ05 1703 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Cyp3a57D3YYZ0 503 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Cops6O88545 324 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Exoc5Q3TPX4 708 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Rab3gap1Q80UJ7 981 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 IncenpQ9WU62 880 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Ssc5dQ8BV57 1371 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Kdm3aQ6PCM1 1323 aa18.42■□□□□ 0.54
Vcan-201ENSMUST00000109543 Ercc3P49135 783 aa18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 Pde4dQ01063 747 aa18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 Gm21985Q6P6P5 1106 aa18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 Mcm3P25206 812 aaKnown RBP18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 Atp8a2P98200 1148 aa18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 MetP16056 1379 aa18.41■□□□□ 0.54
Vcan-201ENSMUST00000109543 Olfml1Q8BSH2 233 aa18.4■□□□□ 0.54
Vcan-201ENSMUST00000109543 Atp8b3Q6UQ17 1335 aa18.4■□□□□ 0.54
Vcan-201ENSMUST00000109543 Atp2b3Q0VF55 1220 aa18.4■□□□□ 0.54
Vcan-201ENSMUST00000109543 Tmem67Q8BR76 992 aa18.4■□□□□ 0.54
Vcan-201ENSMUST00000109543 Ppp4r3bQ922R5 820 aa18.4■□□□□ 0.54
Vcan-201ENSMUST00000109543 Exosc10P56960 887 aaKnown RBP18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Tbc1d30Q69ZT9 766 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ano1Q8BHY3 960 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Fez1Q8K0X8 392 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Lrrc59Q922Q8 307 aaKnown RBP18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Usp42B2RQC2 1324 aaKnown RBP18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Zbtb38Q3LR78 1197 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Zfp51Q3U4L8 781 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Spty2d1Q68FG3 682 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ddrgk1Q80WW9 315 aa18.39■□□□□ 0.53
Vcan-201ENSMUST00000109543 Dhx16G3X8X0 1044 aaKnown RBP18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ubash3aQ3V3E1 624 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Atad2Q8CDM1 1040 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Pms1Q8K119 917 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Plcd1Q8R3B1 756 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ginm1Q91WR6 327 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 SrrtQ99MR6 875 aaKnown RBP18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ndufa8Q9DCJ5 172 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Pes1Q9EQ61 584 aaKnown RBP18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ybx3Q9JKB3 361 aaKnown RBP18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 FosbP13346 338 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Cct2P80314 535 aaKnown RBP18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Limch1Q3UH68 1057 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Znf526Q8BI66 675 aa18.38■□□□□ 0.53
Vcan-201ENSMUST00000109543 Spata31d1bE9QA57 1361 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Cyp2d34L7N463 504 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Hand2Q61039 217 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Cyp7a1Q64505 503 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Fam160b2Q80YR2 744 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Map10Q8BJS7 891 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Srgap1Q91Z69 1062 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 BrapQ99MP8 591 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Rapgef4Q9EQZ6 1011 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Foxo4Q9WVH3 505 aa18.37■□□□□ 0.53
Vcan-201ENSMUST00000109543 Fam184aE9PW83 1143 aa18.36■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ppfia3P60469 1194 aa18.36■□□□□ 0.53
Vcan-201ENSMUST00000109543 Smarcc2Q6PDG5 1213 aa18.36■□□□□ 0.53
Vcan-201ENSMUST00000109543 PdcQ9QW08 244 aa18.36■□□□□ 0.53
Vcan-201ENSMUST00000109543 Trim34bJ3QNR8 485 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Itga6Q61739 1091 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Rrp12Q6P5B0 1295 aaKnown RBP18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Nxf7Q80SZ6 620 aaKnown RBP18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ankrd23Q812A3 306 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Kcnq5Q9JK45 933 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Krt85Q9Z2T6 507 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Bin2D3Z6Q9 489 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Fkbp1aP26883 108 aaKnown RBP18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Slfnl1Q8BHW9 410 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Shisa4Q8CA71 197 aa18.35■□□□□ 0.53
Vcan-201ENSMUST00000109543 Prr5lA2AVJ5 370 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Fsd1Q7TPM6 496 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 R3hcc1Q8BSI6 488 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ncaph2Q8BSP2 607 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Zfp317Q8C0Q5 607 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Appbp2Q9DAX9 585 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Pde3aQ9Z0X4 1141 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Lrp6O88572 1613 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Greb1lB9EJV3 1913 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Cfap73J3QPZ5 306 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Lnx1O70263 728 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Nlrp9aQ66X03 949 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Rufy2Q8R4C2 606 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Gtf2a1Q99PM3 378 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Mrpl44Q9CY73 333 aaKnown RBP18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 Bcl2l12Q9D3J3 255 aa18.34■□□□□ 0.53
Vcan-201ENSMUST00000109543 TrdnE9Q9K5 693 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Gm29094F6Q785 221 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Pank2Q3U4S0 443 aa18.33■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms