RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 MicalclQ9D5U9 680 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pkd2l2Q9JLG4 621 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Atp8b3Q6UQ17 1335 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Plekhg1F6S200 1446 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Zkscan7E9PVW1 718 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Fam135bQ9DAI6 1403 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Plch2A2AP18 1501 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Psrc1Q9D0P7 329 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Asic4Q7TNS7 539 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pik3ap1Q9EQ32 811 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 CalcaP70160 136 aa16.33■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Usp37Q8C0R0 979 aa16.33■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ercc3P49135 783 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Hook2Q7TMK6 716 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Kiaa1524Q8BWY9 907 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Map3k4O08648 1597 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Plxnc1Q9QZC2 1574 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Stx1aO35526 288 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Kcnj4P52189 445 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ttll12Q3UDE2 639 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 TxlnaQ6PAM1 554 aaKnown RBP16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ccdc181Q80ZU5 509 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Cdca8Q8BHX3 289 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Hook3Q8BUK6 718 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Cnksr1A2A9K7 700 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Dapk3O54784 448 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Clip2Q9Z0H8 1047 aa16.33■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Cfap65Q3V0B4 1847 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 TnksQ6PFX9 1320 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Mmp8O70138 465 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 F2rP30558 430 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Jade2Q6ZQF7 829 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Zcrb1Q9CZ96 217 aaKnown RBP16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Lmo7E9PYF4 1699 aaKnown RBP16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Fbf1A2A870 1173 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Abcf1Q6P542 837 aaKnown RBP16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Rab3gap1Q80UJ7 981 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Sult6b1P0CC03 303 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ccdc122Q8BVN0 290 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Uchl5Q9WUP7 329 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Mast3Q3U214 1321 aa16.32■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Mdm2P23804 489 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Mybl2P48972 704 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 P4ha1Q60715 534 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Smarcc2Q6PDG5 1213 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 4931400O07RikQ9D4M5 137 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Klhl10Q9D5V2 608 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Dbndd1Q9CZ00 160 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Nsd3Q6P2L6 1439 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 CltaO08585 235 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Atp6v1aP50516 617 aaKnown RBP16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Nucb1Q02819 459 aaKnown RBP16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Frat2Q8K025 231 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 AnkarA2RT91 1465 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 TsksO54887 585 aa16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ddx17Q501J6 650 aaKnown RBP16.31■□□□□ 0.2
Col2a1-202ENSMUST00000088355 NmiO35309 314 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Myl3P09542 204 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 HellsQ60848 821 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Gas2l2Q5SSG4 860 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ccdc112A0AUP1 442 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 AU019823E9PUQ3 292 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Hvcn1Q3U2S8 269 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Snapc4Q8BP86 1333 aa16.3■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ccdc85cE9Q6B2 420 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Fchsd1Q6PFY1 688 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Lman1Q9D0F3 517 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Nckap5lQ6GQX2 1323 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Gm10093D3YYI8 482 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Hdac1O09106 482 aaKnown RBP16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ssrp1Q08943 708 aaKnown RBP16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 BrapQ99MP8 591 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ak2Q9WTP6 239 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Atp8a2P98200 1148 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Rnf187Q8BFX1 236 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Calml4Q91WQ9 153 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 CpvlQ9D3S9 478 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Stox1B2RQL2 990 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ano2Q8CFW1 1002 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Rtn1Q8K0T0 780 aa16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Rrp9Q91WM3 475 aaKnown RBP16.29■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Gm16486A0A1D5RMD1 1434 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Gna11P21278 359 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Adcy5P84309 1262 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Trim28Q62318 834 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Spag5Q7TME2 1165 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Eif4a1P60843 406 aaKnown RBP16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Timm10P62073 90 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Ifit2Q64112 472 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 RestQ8VIG1 1082 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Olfr247E9PVJ7 320 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Olfr819K7N727 320 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 PrkcshO08795 521 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Haus2Q9CQS9 234 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 LratQ9JI60 231 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Svs3aF2Z472 265 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Cep170Q6A065 1588 aa16.28■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Vps54Q5SPW0 977 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Serpina10Q8R121 448 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 HmcesQ8R1M0 353 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms