RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 RubcnlQ3TD16 648 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Pknox2Q8BG99 474 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 R3hcc1Q8BSI6 488 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Zfp317Q8C0Q5 607 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Usp44Q8C2S0 711 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 ApobrQ8VBT6 942 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Srgap1Q91Z69 1062 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Fam213aQ9CYH2 218 aa18.89■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Zkscan7E9PVW1 718 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Lins1Q3U1D0 764 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 CebpzP53569 1052 aaKnown RBP18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Gsdma2Q32M21 443 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Limch1Q3UH68 1057 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Gm21985Q6P6P5 1106 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 SrrtQ99MR6 875 aaKnown RBP18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Tbc1d7Q9D0K0 293 aa18.88■□□□□ 0.61
Ckap4-201ENSMUST00000053871 AK157302I3ITR1 129 aa18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Hnrnpul1Q8VDM6 859 aaKnown RBP18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Isca1Q9D924 129 aa18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Slc4a1P04919 929 aa18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 TnksQ6PFX9 1320 aa18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Cavin1O54724 392 aa18.87■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Usp28Q5I043 1051 aa18.86■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Tbc1d30Q69ZT9 766 aa18.86■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Atp1a3Q6PIC6 1013 aa18.86■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Bmp2kQ91Z96 1138 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 DmtnQ9WV69 405 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Tbc1d4Q8BYJ6 1307 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Prl3d2F6R3P9 224 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Cyp2d34L7N463 504 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Gse1Q3U3C9 1213 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Ccer1Q9CQL2 403 aa18.85■□□□□ 0.61
Ckap4-201ENSMUST00000053871 1700113H08RikE9Q9Q5 327 aa18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Gm12185Q5NCB2 835 aa18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Fam170aQ66LM6 333 aa18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Nip7Q9CXK8 180 aaKnown RBP18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Ccne2Q9Z238 404 aa18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Shank2Q80Z38 1476 aa18.84■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Nrbp1Q99J45 535 aa18.83■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Mrpl44Q9CY73 333 aaKnown RBP18.83■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Atp8b3Q6UQ17 1335 aa18.83■□□□□ 0.61
Ckap4-201ENSMUST00000053871 Unc13bQ9Z1N9 1602 aa18.83■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Asap2Q7SIG6 958 aa18.83■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ddx54Q8K4L0 874 aaKnown RBP18.83■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Rufy2Q8R4C2 606 aa18.83■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Tjp1P39447 1745 aaKnown RBP18.83■□□□□ 0.6
Ckap4-201ENSMUST00000053871 EzrP26040 586 aaKnown RBP18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ccdc82Q6PG04 518 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Tubb6Q922F4 447 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 NcapgE9PWG6 1004 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Csrnp1P59054 583 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Hook1Q8BIL5 728 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Zkscan8Q8BSL0 588 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Pcdhb15Q91Y04 786 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Slit1Q80TR4 1531 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ano6Q6P9J9 911 aa18.82■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Gm29094F6Q785 221 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 ZyxQ62523 564 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Kcnf1Q7TSH7 493 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 MthfsQ9D110 203 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cfap58B2RW38 873 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Zbtb21E9Q444 1094 aa18.81■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Tmem266Q8BZB3 538 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Usp42B2RQC2 1324 aaKnown RBP18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Sos2Q02384 1333 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Fam102bQ8BQS4 339 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Rdm1Q9CQK3 281 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ptgs1P22437 602 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Gpr182P43142 395 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ftl2P49945 183 aa18.8■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Ccdc162pQ0VG85 912 aa18.79■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Sil1Q9EPK6 465 aa18.79■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cnpy2Q9QXT0 182 aa18.79■□□□□ 0.6
Ckap4-201ENSMUST00000053871 BrapQ99MP8 591 aa18.79■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Sept12Q9D451 317 aa18.79■□□□□ 0.6
Ckap4-201ENSMUST00000053871 VeztQ3ZK22 780 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Prdm1Q60636 856 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Alg3Q8K2A8 438 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cspp1B2RX88 1205 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Tpd52l1O54818 204 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 U2af1l4Q8BGJ9 220 aa18.78■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Vmn2r23E9PXI5 849 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 TsksO54887 585 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Exosc10P56960 887 aaKnown RBP18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Tnks1bp1P58871 1720 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Rgs9O54828 675 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cyp19a1P28649 503 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Atp2b3Q0VF55 1220 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Clca2Q8BG22 942 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Lmod1Q8BVA4 595 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Terf2ipQ91VL8 393 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cdhr2E9Q7P9 1308 aa18.77■□□□□ 0.6
Ckap4-201ENSMUST00000053871 Cadps2Q8BYR5 1297 aa18.77■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Emilin1Q99K41 1017 aa18.77■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Zfp142G5E869 1843 aa18.77■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Hmx1O70218 332 aa18.76■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Cfap157Q0VFX2 523 aa18.76■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Smarcc2Q6PDG5 1213 aa18.76■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Gigyf1Q99MR1 1044 aaKnown RBP18.76■□□□□ 0.59
Ckap4-201ENSMUST00000053871 Pard3Q99NH2 1333 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms