RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Tbc1d8Q9Z1A9 1134 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Zfp142G5E869 1843 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Slit1Q80TR4 1531 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Ric1Q69ZJ7 1422 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Smarcc2Q6PDG5 1213 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Grpel1Q99LP6 217 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 NfkbibQ60778 359 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Rab3gap1Q80UJ7 981 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Tsen34Q8BMZ5 316 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Ssfa2Q922B9 1252 aa21.69■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Klhl34A2AI76 644 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Rgs9O54828 675 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Nlrp1aQ2LKU9 1182 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Chmp3Q9CQ10 224 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 AtrnQ9WU60 1428 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Gys2Q8VCB3 704 aa21.68■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Slc4a1P04919 929 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Hspd1P63038 573 aaKnown RBP21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Adam1aQ60813 791 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Atp1a3Q6PIC6 1013 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 4930572O03RikQ8C5Y0 211 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Trim52Q8CDV4 233 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Aox4Q3TYQ9 1336 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Fbxl16A2RT62 479 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 CrebrfQ8CDG5 640 aaKnown RBP21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Sh3bgrQ9WUZ7 214 aa21.67■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Exosc10P56960 887 aaKnown RBP21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Dnajc5P60904 198 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Limch1Q3UH68 1057 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Nxf2Q4ZGD8 691 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Alg3Q8K2A8 438 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 AK157302I3ITR1 129 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Arid5bQ8BM75 1188 aaKnown RBP21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Amigo3Q8C2S7 508 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Isca1Q9D924 129 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 IncenpQ9WU62 880 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Col22a1E9Q7P1 1613 aa21.66■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Nucb2P81117 420 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Fam102bQ8BQS4 339 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Txnrd1Q9JMH6 613 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Hand2Q61039 217 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Gm21985Q6P6P5 1106 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Plcd3Q8K2J0 785 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Flad1Q8R123 492 aa21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Ncoa5Q91W39 579 aaKnown RBP21.65■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Ppp4r3aQ6P2K6 820 aa21.64■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Eif3bQ8JZQ9 803 aaKnown RBP21.64■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Zpr1Q62384 459 aa21.64■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Pms1Q8K119 917 aa21.64■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tlcd1Q99JT6 247 aa21.64■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Erc1Q99MI1 1120 aa21.64■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 IbspQ61711 324 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Fsd1Q7TPM6 496 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Snw1Q9CSN1 536 aaKnown RBP21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Cwc25Q9DBF7 416 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Dusp10Q9ESS0 483 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Cnpy2Q9QXT0 182 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Myd88P22366 296 aa21.63■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Sos2Q02384 1333 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Oas2E9Q9A9 742 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tmem109Q3UBX0 243 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Atf3Q60765 181 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Mrpl44Q9CY73 333 aaKnown RBP21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Gm21680A0A0G2JGR8 267 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Trim59Q922Y2 403 aa21.62■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Usp42B2RQC2 1324 aaKnown RBP21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Cfap58B2RW38 873 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Eya2O08575 532 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Nlrp3Q8R4B8 1033 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Nwd2Q6P5U7 1742 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Kif3aP28741 701 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Ttc19Q8CC21 365 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Golph3lQ8R088 285 aaKnown RBP21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Osbpl5Q9ER64 874 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Syt10Q9R0N4 523 aa21.61■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Col18a1P39061 1774 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Abca3Q8R420 1704 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Vmn2r23E9PXI5 849 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 TrdnE9Q9K5 693 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tpd52l1O54818 204 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Spty2d1Q68FG3 682 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Asap2Q7SIG6 958 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tmem67Q8BR76 992 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Ccz1Q8C1Y8 480 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Krt25Q8VCW2 446 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Tubb6Q922F4 447 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Cspp1B2RX88 1205 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Ccdc82Q6PG04 518 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 R3hcc1Q8BSI6 488 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Nop14Q8R3N1 860 aaKnown RBP21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Stard3nlQ9DCI3 235 aa21.6■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Pramel3A2AHA7 463 aa21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Gm7903A2AWL1 463 aa21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 AV320801A2AWL3 467 aa21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Gm15023L7MUB4 467 aa21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Ankib1Q6ZPS6 1085 aa21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Anxa1P10107 346 aaKnown RBP21.59■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Atp2b1G5E829 1220 aa21.58■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 Mtmr3Q8K296 1196 aa21.58■■□□□ 1.05
Ccdc3-201ENSMUST00000027988 BrapQ99MP8 591 aa21.58■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms