RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 TMEM53Q6P2H8 277 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 CBLL1Q75N03 491 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 SLC16A14Q7RTX9 510 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 HIPK1Q86Z02 1210 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 NRMQ8IXM6 262 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 PAQR4Q8N4S7 273 aaPredicted RBP17.25■□□□□ 0.35
ATN1-204ENST00000541029 SLC30A7Q8NEW0 376 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 HDAC2Q92769 488 aaKnown RBP17.25■□□□□ 0.35
ATN1-204ENST00000541029 HSH2DQ96JZ2 352 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 HOPXQ9BPY8 73 aaPredicted RBP17.25■□□□□ 0.35
ATN1-204ENST00000541029 RNF121Q9H920 327 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 MYEF2Q9P2K5 600 aaKnown RBP17.25■□□□□ 0.35
ATN1-204ENST00000541029 MXRA5Q9NR99 2828 aa17.25■□□□□ 0.35
ATN1-204ENST00000541029 IGKV1D-43A0A0B4J1Z2 117 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 NPIPB13A6NJU9 1138 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 NPIPB4C9JG80 1138 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 M0R233 179 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 FFAR1O14842 300 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 STAMBPO95630 424 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 SERPINA1P01009 418 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 CCL2P13500 99 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 MAKP20794 623 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 IFNA8P32881 189 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 LSP1P33241 339 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 ZNF133P52736 654 aaPredicted RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 CD47Q08722 323 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 SLC36A2Q495M3 483 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 IFI44LQ53G44 452 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 CYB5R2Q6BCY4 276 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 HACD2Q6Y1H2 254 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 IGFN1Q86VF2 1251 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 LRP11Q86VZ4 500 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 LRRC18Q8N456 261 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 RBM15BQ8NDT2 890 aaKnown RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 NEU4Q8WWR8 484 aaPredicted RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 NMD3Q96D46 503 aaKnown RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 MDFIQ99750 246 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 ELAC2Q9BQ52 826 aaKnown RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 FNDC11Q9BVV2 318 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 OR51B6Q9H340 312 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 TXNIPQ9H3M7 391 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 EFCAB1Q9HAE3 211 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 STX18Q9P2W9 335 aaKnown RBP17.24■□□□□ 0.35
ATN1-204ENST00000541029 UGT2A1Q9Y4X1 527 aa17.24■□□□□ 0.35
ATN1-204ENST00000541029 COL6A5A8TX70 2615 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 TRAV27A0A087WT01 109 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 SYNGR3O43761 229 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 FAM157BP0CG42 384 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 SAGP10523 405 aaPredicted RBP17.23■□□□□ 0.35
ATN1-204ENST00000541029 APEHP13798 732 aaKnown RBP17.23■□□□□ 0.35
ATN1-204ENST00000541029 NCK1P16333 377 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 CDAP32320 146 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 ALDH3B1P43353 468 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 SEC24CP53992 1094 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 MAD2L1BPQ15013 274 aaPredicted RBP17.23■□□□□ 0.35
ATN1-204ENST00000541029 TRAM2Q15035 370 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 CHRFAM7AQ494W8 412 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 NRN1LQ496H8 165 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 IQCCQ4KMZ1 466 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 CLDN22Q8N7P3 220 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 NSMAFQ92636 917 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 FAM162AQ96A26 154 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 KCNK17Q96T54 332 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 KCTD14Q9BQ13 255 aaPredicted RBP17.23■□□□□ 0.35
ATN1-204ENST00000541029 FAM107BQ9H098 131 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 MYLK2Q9H1R3 596 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 ABCD2Q9UBJ2 740 aa17.23■□□□□ 0.35
ATN1-204ENST00000541029 PRSS23O95084 383 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 IGHMP01871 453 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 MMP7P09237 267 aaPredicted RBP17.22■□□□□ 0.35
ATN1-204ENST00000541029 EVX1P49640 407 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 GZMKP49863 264 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 DPPA2Q7Z7J5 298 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 OR13C2Q8NGS9 318 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 OR51A7Q8NH64 312 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 NABP1Q96AH0 204 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 TSPAN32Q96QS1 320 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 CDH20Q9HBT6 801 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 REV1Q9UBZ9 1251 aa17.22■□□□□ 0.35
ATN1-204ENST00000541029 A0A1W2PPW3 197 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 EFCAB9A8MZ26 197 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 LYNX1G3V0Z9 82 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 LYNX1P0DP58 116 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 ZNF23P17027 643 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 GIFP27352 417 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 GPR4P46093 362 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 CTXN1P60606 82 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 PSME3P61289 254 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 RPL27P61353 136 aaKnown RBP17.21■□□□□ 0.35
ATN1-204ENST00000541029 MRPS34P82930 218 aaKnown RBP17.21■□□□□ 0.35
ATN1-204ENST00000541029 PRKCDQ05655 676 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 FHL1Q13642 323 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 TBC1D28Q2M2D7 210 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 ZNF730Q6ZMV8 503 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 FKBP9P1Q75LS8 142 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 ZNF786Q8N393 782 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 LRRC75AQ8NAA5 344 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 UBASH3BQ8TF42 649 aa17.21■□□□□ 0.35
ATN1-204ENST00000541029 ACOT11Q8WXI4 607 aaPredicted RBP17.21■□□□□ 0.35
ATN1-204ENST00000541029 ALG12Q9BV10 488 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms