RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MT-ND5P03915 603 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 SERPINA5P05154 406 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 LCKP06239 509 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 CCNOP22674 350 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 NR4A1P22736 598 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 IFNGR2P38484 337 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 PPOXP50336 477 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 GYS2P54840 703 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 CTXN1P60606 82 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 RPL27P61353 136 aaKnown RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 PCBD1P61457 104 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 VLDLRP98155 873 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 GGTLC2Q14390 218 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 RAB39AQ14964 217 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 LAPTM4AQ15012 233 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 EFNB3Q15768 340 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ADIPOQQ15848 244 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 NKPD1Q17RQ9 610 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 THEM4Q5T1C6 240 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 MBOAT2Q6ZWT7 520 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF627Q7L945 461 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 TSPYL5Q86VY4 417 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 SKA3Q8IX90 412 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ALDH16A1Q8IZ83 802 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 LRRC18Q8N456 261 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ANKS4BQ8N8V4 417 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 SNX33Q8WV41 574 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 NEU4Q8WWR8 484 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 MS4A3Q96HJ5 214 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 NSMCE2Q96MF7 247 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF347Q96SE7 839 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ALG12Q9BV10 488 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 MYLK2Q9H1R3 596 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ANKRD19PQ9H560 264 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 SMURF2Q9HAU4 748 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 YAE1D1Q9NRH1 226 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 GMPR2Q9P2T1 348 aaKnown RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ABCD2Q9UBJ2 740 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 EIF3KQ9UBQ5 218 aaKnown RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 TAGLN3Q9UI15 199 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF346Q9UL40 294 aaKnown RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 TMCC3Q9ULS5 477 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 A4GNTQ9UNA3 340 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 HIF3AQ9Y2N7 669 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ENPP4Q9Y6X5 453 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-232ENST00000489053 IGHV4-30-2A0A087WSY4 118 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 LOC390937A0A1W2PQ73 354 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 NPIPB13A6NJU9 1138 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 NPIPB4C9JG80 1138 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 INAFM1C9JVW0 142 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 J3KTA2 159 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 M0R233 179 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 TRMUO75648 421 aaKnown RBP7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SLC2A10O95528 541 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 ADRA2AP08913 450 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 RHCEP18577 417 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 USF1P22415 310 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-232ENST00000489053 RAD52P43351 418 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 GPR4P46093 362 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 CENPAP49450 140 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SPIBQ01892 262 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 HGFACQ04756 655 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 PRKCDQ05655 676 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 MOGQ16653 247 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 RGS7BPQ6MZT1 257 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-232ENST00000489053 ARL9Q6T311 187 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 IGFN1Q86VF2 1251 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 PGAM4Q8N0Y7 254 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 OR13C2Q8NGS9 318 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 LIPHQ8WWY8 451 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 POM121Q96HA1 1249 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 FAM46AQ96IP4 442 aaKnown RBP7.9□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF570Q96NI8 536 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 CDRT15Q96T59 188 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SYT3Q9BQG1 590 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 OR51B6Q9H340 312 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 MS4A5Q9H3V2 200 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 RERGLQ9H628 205 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 NMNAT1Q9HAN9 279 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SIAEQ9HAT2 523 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 B3GNT2Q9NY97 397 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 POLR1DQ9Y2S0 133 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 SNX13Q9Y5W8 968 aa7.9□□□□□ -1.14
HDAC6-232ENST00000489053 A0A1W2PRQ8 180 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 TPD52L2O43399 206 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 SYNGR3O43761 229 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 TLX2O43763 284 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 LY6HO94772 140 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 NDUFB2O95178 105 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 FABP3P05413 133 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 PATE4P0C8F1 98 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 FAM157BP0CG42 384 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 APEHP13798 732 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 DAOP14920 347 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF14P17017 642 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms