RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 DNAJC9Q8WXX5 260 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 NSMAFQ92636 917 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 GABARAPL1Q9H0R8 117 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 NGBQ9NPG2 151 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 OBP2BQ9NPH6 170 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 TMEM38BQ9NVV0 291 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 DCHS2Q6V1P9 2916 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 SAC3D1A6NKF1 404 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 GOSR1O95249 250 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 OSMP13725 252 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 B4GALT1P15291 398 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 HIST1H1CP16403 213 aaKnown RBP16.8■□□□□ 0.28
HOXA9-202ENST00000396345 POU1F1P28069 291 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 CDKN2AP42771 156 aaKnown RBP16.8■□□□□ 0.28
HOXA9-202ENST00000396345 BEX5Q5H9J7 111 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 SLC35F1Q5T1Q4 408 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 PTCHD4Q6ZW05 846 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 OR2T33Q8NG76 320 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 OR4K13Q8NH42 304 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 PAPOLBQ9NRJ5 636 aaKnown RBP16.8■□□□□ 0.28
HOXA9-202ENST00000396345 VSX1Q9NZR4 365 aaPredicted RBP16.8■□□□□ 0.28
HOXA9-202ENST00000396345 OAZ3Q9UMX2 235 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 BAIAP2Q9UQB8 552 aa16.8■□□□□ 0.28
HOXA9-202ENST00000396345 ARPC4-TTLL3A0A0A6YYG9 625 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 DEFB108AA8MXU0 73 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 CAPZA2P47755 286 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 FBXW10Q5XX13 1052 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 LEG1Q6P5S2 330 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 SEZ6L2Q6UXD5 910 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 CCDC36Q8IYA8 594 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 LNX2Q8N448 690 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 SLC22A24Q8N4F4 322 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 OR4Q3Q8NH05 313 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 PIK3IP1Q96FE7 263 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 C1QTNF6Q9BXI9 259 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 SYT4Q9H2B2 425 aa16.79■□□□□ 0.28
HOXA9-202ENST00000396345 FAM221AA4D161 298 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 SIAH2O43255 324 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 CTAG2O75638 210 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 RENP00797 406 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 OR8G3PP0DMU2 310 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 PRF1P14222 555 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 ZNF83P51522 516 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 TUBA1BP68363 451 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 TUBA4AP68366 448 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.78■□□□□ 0.28
HOXA9-202ENST00000396345 TUBA1AQ71U36 451 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 OR52E2Q8NGJ4 325 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 PLPPR2Q96GM1 343 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 SNX18Q96RF0 628 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 NMNAT3Q96T66 252 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 RASSF1Q9NS23 344 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 KRT84Q9NSB2 600 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 NPAP1Q9NZP6 1156 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 UGT2A1Q9Y4X1 527 aa16.78■□□□□ 0.28
HOXA9-202ENST00000396345 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SLC16A7O60669 478 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 FARS2O95363 451 aaKnown RBP16.77■□□□□ 0.28
HOXA9-202ENST00000396345 BAG2O95816 211 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 HRGP04196 525 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 CTLA4P16410 223 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 PAX7P23759 505 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 CDAP32320 146 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 GUCA1AP43080 201 aaPredicted RBP16.77■□□□□ 0.28
HOXA9-202ENST00000396345 MRPS34P82930 218 aaKnown RBP16.77■□□□□ 0.28
HOXA9-202ENST00000396345 GINS1Q14691 196 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SGCAQ16586 387 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 PGGHGQ32M88 737 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 KDM4DQ6B0I6 523 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SLC27A4Q6P1M0 643 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 TMEM200AQ86VY9 491 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SKA3Q8IX90 412 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 PQLC1Q8N2U9 271 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 PARP8Q8N3A8 854 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 IQCF1Q8N6M8 205 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SDR9C7Q8NEX9 313 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 HTRA1Q92743 480 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 RERGLQ9H628 205 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 ESRP2Q9H6T0 727 aaKnown RBP16.77■□□□□ 0.28
HOXA9-202ENST00000396345 SEC61A2Q9H9S3 476 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 KLHL21Q9UJP4 597 aa16.77■□□□□ 0.28
HOXA9-202ENST00000396345 ABCA4P78363 2273 aa16.77■□□□□ 0.27
HOXA9-202ENST00000396345 ABCA12Q86UK0 2595 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 A0A1W2PPL8 197 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 M0R1B8 84 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 MITFO75030 526 aaPredicted RBP16.76■□□□□ 0.27
HOXA9-202ENST00000396345 KHDRBS3O75525 346 aaKnown RBP16.76■□□□□ 0.27
HOXA9-202ENST00000396345 HLA-HP01893 362 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 CD79AP11912 226 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NPR2P20594 1047 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 GRK5P34947 590 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 GIPRP48546 466 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 CRISP1P54107 249 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NR1H2P55055 460 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 ETFDHQ16134 617 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NRN1LQ496H8 165 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NCMAPQ5T1S8 102 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 DNM1P34Q6PK57 102 aa16.76■□□□□ 0.27
HOXA9-202ENST00000396345 NPEPL1Q8NDH3 523 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms