RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 MTRF1LQ9UGC7 380 aaKnown RBP0.82□□□□□ -2.28
LRCH3-209ENST00000452660 RIMS3Q9UJD0 308 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 ADAM28Q9UKQ2 775 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 NUDCQ9Y266 331 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 MMACHCQ9Y4U1 282 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 YLPM1P49750 1951 aaKnown RBP0.82□□□□□ -2.28
LRCH3-209ENST00000452660 TET2Q6N021 2002 aaPredicted RBP0.82□□□□□ -2.28
LRCH3-209ENST00000452660 MPDZO75970 2070 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 PLCE1Q9P212 2302 aa0.82□□□□□ -2.28
LRCH3-209ENST00000452660 MED12Q93074 2177 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 LRP2P98164 4655 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ROS1P08922 2347 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 A0A0A6YYC8 382 aaPredicted RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 LCE6AA0A183 80 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 A0A1B0GUH1 482 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 HELTA6NFD8 242 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 I3L1I5 382 aaPredicted RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 NVLO15381 856 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CTAG2O75638 210 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 APODP05090 189 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 RBMY1CP0DJD4 496 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CA5AP35218 305 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 SERPINH1P50454 418 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 PLK1P53350 603 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 RAG2P55895 527 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 HERVK_113P63132 956 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ERVK-8P63133 956 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CCL7P80098 99 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 TSPY1Q01534 308 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 C17orf67Q0P5P2 114 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 C1orf61Q13536 156 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 PDGFRLQ15198 375 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ZNF77Q15935 545 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ZSWIM7Q19AV6 140 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 TYSND1Q2T9J0 566 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 HNRNPA1L2Q32P51 320 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 DMRTC1Q5HYR2 192 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 GLRA4Q5JXX5 417 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 FAM120AOSQ5T036 256 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 C12orf60Q5U649 245 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 SDHAF4Q5VUM1 108 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 NANOGP8Q6NSW7 305 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CD300LGQ6UXG3 332 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 GBP6Q6ZN66 633 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 LINC00696Q6ZRV3 163 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 PRSS42Q7Z5A4 293 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 GOLGA7Q7Z5G4 137 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 TMEM150AQ86TG1 271 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 GPBP1Q86WP2 473 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CMTM8Q8IZV2 173 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 IQCKQ8N0W5 287 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 OR8H2Q8N162 312 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 LRRC17Q8N6Y2 441 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 DNAAF3Q8N9W5 541 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ST6GALNAC3Q8NDV1 305 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 FDCSPQ8NFU4 85 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 OR4A16Q8NH70 328 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 OR4C6Q8NH72 309 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 RXFP2Q8WXD0 754 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 KLK6Q92876 244 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CPB2Q96IY4 423 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CELF6Q96J87 481 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CFAP53Q96M91 514 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 COL21A1Q96P44 957 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CATSPER2Q96P56 530 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 RNF126Q9BV68 326 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ERVK-6Q9BXR3 956 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CRNKL1Q9BZJ0 848 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 ZNF430Q9H8G1 570 aaPredicted RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 VAT1LQ9HCJ6 419 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 DMAP1Q9NPF5 467 aaPredicted RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 MRPL40Q9NQ50 206 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 STX8Q9UNK0 236 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CARHSP1Q9Y2V2 147 aaKnown RBP0.81□□□□□ -2.28
LRCH3-209ENST00000452660 UGT2A1Q9Y4X1 527 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 UBIAD1Q9Y5Z9 338 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 FKBP7Q9Y680 259 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 MALRD1Q5VYJ5 2156 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 SF3B1O75533 1304 aaKnown RBP eCLIP0.81□□□□□ -2.283e-6■■■■■ 51.8
LRCH3-209ENST00000452660 ZNF532Q9HCE3 1301 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 DNAH17Q9UFH2 4485 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 CCDC88CQ9P219 2028 aa0.81□□□□□ -2.28
LRCH3-209ENST00000452660 DNAH5Q8TE73 4624 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 ZNF407Q9C0G0 2248 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 WNK2Q9Y3S1 2297 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 LOC100131303A0A0U1RQF7 123 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 D6RAR5 112 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 G3V4G9 280 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 TLR4O00206 839 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 FIBPO43427 364 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 GMNNO75496 209 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 GP1BAP07359 652 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 HSPD1P10809 573 aaKnown RBP0.8□□□□□ -2.28
LRCH3-209ENST00000452660 H2AFXP16104 143 aaPredicted RBP0.8□□□□□ -2.28
LRCH3-209ENST00000452660 ATF6P18850 670 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 TMOD1P28289 359 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 CCND2P30279 289 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 SERPINB6P35237 376 aa0.8□□□□□ -2.28
LRCH3-209ENST00000452660 ARRB1P49407 418 aaPredicted RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms