RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HMGN1P05114 100 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 AGAP20933 346 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CTSSP25774 331 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 NOS3P29474 1203 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 AQP4P55087 323 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 MYBPC1Q00872 1141 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 KRR1Q13601 381 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 NUFIP2Q7Z417 695 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 WDFY1Q8IWB7 410 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 TMEM123Q8N131 208 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 RASD2Q96D21 266 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC25A44Q96H78 314 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 HRASLS5Q96KN8 279 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 TEX12Q9BXU0 123 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 FAM118AQ9NWS6 357 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 Q9UFV3 132 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CLDN1O95832 211 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 ACADSP16219 412 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 ACVR1BP36896 505 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 SELENOPP49908 381 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 SIRPAP78324 504 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CDSNQ15517 529 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 MESTQ5EB52 335 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 C12orf73Q69YU5 71 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 NIPAL3Q6P499 406 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CASP12Q6UXS9 341 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 IZUMO2Q6UXV1 221 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 ADCK1Q86TW2 530 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CNEP1R1Q8N9A8 125 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 PITX2Q99697 317 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 MRPL13Q9BYD1 178 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CMC2Q9NRP2 79 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF629Q9UEG4 869 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 NDRG4Q9ULP0 352 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 SPTBN1Q01082 2364 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 LOC100130705A0A1B0GUX0 176 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 OR6C65A6NJZ3 312 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 XKRYO14609 159 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 TRMUO75648 421 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 IGHG1P01857 330 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 PGA4P0DJD7 388 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 PGA3P0DJD8 388 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 HIST1H1CP16403 213 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 CHRNB4P30926 498 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 OPRM1P35372 400 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 OR3A2P47893 321 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 RUNX1T1Q06455 604 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF362Q5T0B9 420 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC35F1Q5T1Q4 408 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 VWA1Q6PCB0 445 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 DHRSXQ8N5I4 330 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 CA5BP1Q8WTZ4 195 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ASB5Q8WWX0 329 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 HDAC2Q92769 488 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF566Q969W8 418 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 APH1AQ96BI3 265 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 STARD4Q96DR4 205 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 LRR1Q96L50 414 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 SNX18Q96RF0 628 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 KCNK17Q96T54 332 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ALG12Q9BV10 488 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ADI1Q9BV57 179 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 PRRG3Q9BZD7 231 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 KLHL21Q9UJP4 597 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 ICE1Q9Y2F5 2266 aa17.55■□□□□ 0.4
PDLIM2-221ENST00000622702 FREM1Q5H8C1 2179 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 SURF4O15260 269 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 AHCYL1O43865 530 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC43A1O75387 559 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 CLDN14O95500 239 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 GGT2P36268 569 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 ADARB1P78563 741 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 CAMK2DQ13557 499 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 KEAP1Q14145 624 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 TTC23Q5W5X9 447 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 BTLAQ7Z6A9 289 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF555Q8NEP9 628 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 NOXO1Q8NFA2 376 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 OR4K13Q8NH42 304 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC38A2Q96QD8 506 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 PLSCR4Q9NRQ2 329 aa17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 PLEKHB1Q9UF11 243 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 FOXD3Q9UJU5 478 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-221ENST00000622702 PRSS37A4D1T9 235 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 RIIAD1A6NNX1 92 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 H0YAE9 185 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 ARHGEF9O43307 516 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 CGAP01215 116 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 IFNGP01579 166 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 CD8BP10966 210 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 EDNRAP25101 427 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 CDKN2AP42771 156 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 HSPA13P48723 471 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 HIST3H3Q16695 136 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 TFAP2EQ6VUC0 442 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 PTCHD4Q6ZW05 846 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 C20orf196Q8IYI0 205 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF100Q8IYN0 542 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 NPEPL1Q8NDH3 523 aa17.53■□□□□ 0.4
PDLIM2-221ENST00000622702 OR52E2Q8NGJ4 325 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms