RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507		A0A087WUU8	490 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	PDLIM1	O00151	329 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	GADD45G	O95257	159 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	BCL10	O95999	233 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	ASAH2B	P0C7U1	165 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	CLRN1	P58418	232 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	SMIM11A	P58511	58 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	LSM11	P83369	360 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	3e-6	■□□□□ 8.5
FDPS-204	ENST00000461507	KRTAP1-1	Q07627	177 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	TRIM25	Q14258	630 aa	Known RBP	11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	GABRA6	Q16445	453 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	CEACAM16	Q2WEN9	425 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	PGGHG	Q32M88	737 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	ALG10	Q5BKT4	473 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	MTX3	Q5HYI7	312 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	PODNL1	Q6PEZ8	512 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	KLHL17	Q6TDP4	642 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	DNM1P46	Q6ZS02	220 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	MBOAT2	Q6ZWT7	520 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	OAF	Q86UD1	273 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	DTX2	Q86UW9	622 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	OR13C2	Q8NGS9	318 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	MOSPD2	Q8NHP6	518 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	NDEL1	Q9GZM8	345 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	CRLF2	Q9HC73	371 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	MAN2C1	Q9NTJ4	1040 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	TAS2R5	Q9NYW4	299 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	NPAP1	Q9NZP6	1156 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	POU2F3	Q9UKI9	436 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	TMCC3	Q9ULS5	477 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	LAMP3	Q9UQV4	416 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	POFUT2	Q9Y2G5	429 aa		11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	ANK3	Q12955	4377 aa	Known RBP	11.13	□□□□□ -0.63
FDPS-204	ENST00000461507	TRBV4-1	A0A0J9YWV2	114 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	SHISA9	B4DS77	424 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	WNT11	O96014	354 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	MAK	P20794	623 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	RRM2	P31350	389 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	RPL4	P36578	427 aa	Known RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ERF	P50548	548 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	DAP3	P51398	398 aa	Known RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TUBA1B	P68363	451 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TUBA4A	P68366	448 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ARF1	P84077	181 aa	Known RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	CHRNB3	Q05901	458 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TAF11	Q15544	211 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	FAM98B	Q52LJ0	330 aa	Known RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	C1QTNF12	Q5T7M4	302 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TUBA1A	Q71U36	451 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	SPATA24	Q86W54	205 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	OR1K1	Q8NGR3	316 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	SMAP2	Q8WU79	429 aa	Predicted RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	NEUROG1	Q92886	237 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF566	Q969W8	418 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ASB9	Q96DX5	294 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	C7orf34	Q96L11	122 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ADAD1	Q96M93	576 aa	Known RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	BTBD10	Q9BSF8	475 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	LINC00470	Q9BZP3	86 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	C1orf21	Q9H246	121 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	GPR35	Q9HC97	309 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	SLC17A5	Q9NRA2	495 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	TMEM5	Q9Y2B1	443 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	AMDHD2	Q9Y303	409 aa		11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.12	□□□□□ -0.63
FDPS-204	ENST00000461507	ABCA1	O95477	2261 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	LOC102725191	A0A1B0GVB3	256 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	SMAD7	O15105	426 aa	Known RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	OR10H3	O60404	316 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	FZD7	O75084	574 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	DNAJC8	O75937	253 aa	Predicted RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	ZNF432	O94892	652 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	PRSS23	O95084	383 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	IGHG1	P01857	330 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	RASSF2	P50749	326 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	SH3BGR	P55822	239 aa	Predicted RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	CTXN1	P60606	82 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	PRPS1	P60891	318 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	MYBPC1	Q00872	1141 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	MS4A2	Q01362	244 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	PRKCD	Q05655	676 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	CD47	Q08722	323 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	ZP4	Q12836	540 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	FLOT2	Q14254	428 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	LAPTM4A	Q15012	233 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	FXN	Q16595	210 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	TBRG1	Q3YBR2	411 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	PHYHD1	Q5SRE7	291 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	LCN8	Q6JVE9	175 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	TMEM108	Q6UXF1	575 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	LINGO2	Q7L985	606 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	HDDC2	Q7Z4H3	204 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	TSEN54	Q7Z6J9	526 aa	Known RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	C20orf196	Q8IYI0	205 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	RNF113B	Q8IZP6	322 aa	Known RBP	11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	TMEM123	Q8N131	208 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	C17orf78	Q8N4C9	275 aa		11.11	□□□□□ -0.63
FDPS-204	ENST00000461507	SYT14	Q8NB59	555 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms