RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 VMACQ2NL98 169 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 SLC35D2Q76EJ3 337 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 CCDC80Q76M96 950 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 PIWIL3Q7Z3Z3 882 aaKnown RBP16.71■□□□□ 0.27
HDAC11-203ENST00000402271 CDK20Q8IZL9 346 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 ZCCHC24Q8N2G6 241 aaKnown RBP16.71■□□□□ 0.27
HDAC11-203ENST00000402271 SLC26A7Q8TE54 656 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 SHARPINQ9H0F6 387 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 GLTPQ9NZD2 209 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 ZNF229Q9UJW7 825 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 FBXL3Q9UKT7 428 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 KCNS2Q9ULS6 477 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 SLC7A7Q9UM01 511 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 MALRD1Q5VYJ5 2156 aa16.71■□□□□ 0.27
HDAC11-203ENST00000402271 LOC100289279A0A1B0GTE1 492 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 FBP2O00757 339 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 UBL3O95164 117 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 ASAH2BP0C7U1 165 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 IGFBP5P24593 272 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 THBS2P35442 1172 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 GLRXP35754 106 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 GIPRP48546 466 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 PTDSS1P48651 473 aaKnown RBP16.7■□□□□ 0.26
HDAC11-203ENST00000402271 RAB1AP62820 205 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 TRMT5Q32P41 509 aaKnown RBP16.7■□□□□ 0.26
HDAC11-203ENST00000402271 IQCCQ4KMZ1 466 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 NANOGP8Q6NSW7 305 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 ZNF786Q8N393 782 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 TMEM158Q8WZ71 300 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 MRPL24Q96A35 216 aaKnown RBP16.7■□□□□ 0.26
HDAC11-203ENST00000402271 SLC25A44Q96H78 314 aaPredicted RBP16.7■□□□□ 0.26
HDAC11-203ENST00000402271 PRSS27Q9BQR3 290 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 NANOGQ9H9S0 305 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 DYNLRB1Q9NP97 96 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 SPEF1Q9Y4P9 236 aa16.7■□□□□ 0.26
HDAC11-203ENST00000402271 FBN3Q75N90 2809 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 RAB36O95755 333 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 TACSTD2P09758 323 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 H2AFXP16104 143 aaPredicted RBP16.69■□□□□ 0.26
HDAC11-203ENST00000402271 CYLC2Q14093 348 aaPredicted RBP16.69■□□□□ 0.26
HDAC11-203ENST00000402271 MSMPQ1L6U9 139 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 CALHM3Q86XJ0 350 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 SKA3Q8IX90 412 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 PHC2Q8IXK0 858 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 LRRC17Q8N6Y2 441 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 ARIH2OSQ8N7S6 290 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 ZNF566Q969W8 418 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 MRPL37Q9BZE1 423 aaKnown RBP16.69■□□□□ 0.26
HDAC11-203ENST00000402271 SVEP1Q4LDE5 3571 aa16.69■□□□□ 0.26
HDAC11-203ENST00000402271 SH3PXD2BA1X283 911 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 FXYD1O00168 92 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 KPNA4O00629 521 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-203ENST00000402271 PHF1O43189 567 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-203ENST00000402271 RNF13O43567 381 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 SYNGR3O43761 229 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 ENTPD5O75356 428 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 VIMP08670 466 aaKnown RBP16.68■□□□□ 0.26
HDAC11-203ENST00000402271 ADRA2AP08913 450 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 FXNQ16595 210 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 COQ5Q5HYK3 327 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 LRFN4Q6PJG9 635 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 SLC22A24Q8N4F4 322 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 UBASH3BQ8TF42 649 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 SH3GL1Q99961 368 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 TMEM120AQ9BXJ8 343 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 MEPEQ9NQ76 525 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-203ENST00000402271 MRGBPQ9NV56 204 aa16.68■□□□□ 0.26
HDAC11-203ENST00000402271 ARGLU1Q9NWB6 273 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-203ENST00000402271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■□□□□ 9.4
HDAC11-203ENST00000402271 LILRA1O75019 489 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 NPPAP01160 153 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 HIST1H2ABP04908 130 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 PGA4P0DJD7 388 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 PGA3P0DJD8 388 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 RPS23P62266 143 aaKnown RBP16.67■□□□□ 0.26
HDAC11-203ENST00000402271 GALK2Q01415 458 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 RIN1Q13671 783 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 MELKQ14680 651 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 RAB39AQ14964 217 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 RABL3Q5HYI8 236 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 FAM120AOSQ5T036 256 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 HIST3H2AQ7L7L0 130 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 ZNF584Q8IVC4 421 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 OR8J3Q8NGG0 315 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 FGFBP3Q8TAT2 258 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 HPS1Q92902 700 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 HIST1H2ACQ93077 130 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 LRRC58Q96CX6 371 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 SOX7Q9BT81 388 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 POLR2J2Q9GZM3 115 aaKnown RBP16.67■□□□□ 0.26
HDAC11-203ENST00000402271 POLR2J3Q9H1A7 115 aaKnown RBP16.67■□□□□ 0.26
HDAC11-203ENST00000402271 CHODLQ9H9P2 273 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 TMEM38BQ9NVV0 291 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 STAB1Q9NY15 2570 aa16.67■□□□□ 0.26
HDAC11-203ENST00000402271 LRP5LA4QPB2 252 aa16.66■□□□□ 0.26
HDAC11-203ENST00000402271 M0R233 179 aa16.66■□□□□ 0.26
HDAC11-203ENST00000402271 DHHO43323 396 aa16.66■□□□□ 0.26
HDAC11-203ENST00000402271 IGF2P01344 180 aa16.66■□□□□ 0.26
HDAC11-203ENST00000402271 SERPINA5P05154 406 aa16.66■□□□□ 0.26
HDAC11-203ENST00000402271 PATE4P0C8F1 98 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms