RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ANK3Q12955 4377 aaKnown RBP13.77□□□□□ -0.21
CRLF3-203ENST00000578692 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 TRAPPC13A5PLN9 417 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 SASH3O75995 380 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 CH25HO95992 272 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 THY1P04216 161 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 CD247P20963 164 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 USF1P22415 310 aaPredicted RBP13.76□□□□□ -0.21
CRLF3-203ENST00000578692 THBS4P35443 961 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 WDR88Q6ZMY6 472 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF627Q7L945 461 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 SNX32Q86XE0 403 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 WDFY1Q8IWB7 410 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 ANKS4BQ8N8V4 417 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 TAMM41Q96BW9 452 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 SH3GL1Q99961 368 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 TMEM120AQ9BXJ8 343 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 ULBP2Q9BZM5 246 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF442Q9H7R0 627 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 NANSQ9NR45 359 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 FBXO9Q9UK97 447 aaPredicted RBP13.76□□□□□ -0.21
CRLF3-203ENST00000578692 SLC7A7Q9UM01 511 aa13.76□□□□□ -0.21
CRLF3-203ENST00000578692 NDUFS8O00217 210 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 LYPD3O95274 346 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 HLA-HP01893 362 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 CD79AP11912 226 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 NPR2P20594 1047 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 BIDP55957 195 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
CRLF3-203ENST00000578692 PIGFQ07326 219 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 ZP4Q12836 540 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF74Q16587 644 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 GSG1Q2KHT4 349 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 TRMT5Q32P41 509 aaKnown RBP13.75□□□□□ -0.21
CRLF3-203ENST00000578692 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 CCDC80Q76M96 950 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 MPP4Q96JB8 637 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 FOXB1Q99853 325 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 RAB1BQ9H0U4 201 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
CRLF3-203ENST00000578692 TAS2R5Q9NYW4 299 aa13.75□□□□□ -0.21
CRLF3-203ENST00000578692 LOC390937A0A1W2PQ73 354 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 VWC2LB2RUY7 222 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 HIST1H2ABP04908 130 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
CRLF3-203ENST00000578692 IFNGR1P15260 489 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 CSNK1A1P48729 337 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 PPOXP50336 477 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 DAG1Q14118 895 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 CARTPTQ16568 116 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 CHRFAM7AQ494W8 412 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 RABL3Q5HYI8 236 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 HIST3H2AQ7L7L0 130 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 SPATA21Q7Z572 469 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 TSPYL5Q86VY4 417 aaPredicted RBP13.74□□□□□ -0.21
CRLF3-203ENST00000578692 LRRC17Q8N6Y2 441 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 OR6X1Q8NH79 312 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 HIST1H2ACQ93077 130 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 LRRC58Q96CX6 371 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF75AQ96N20 296 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 FOXN4Q96NZ1 517 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 KCNK17Q96T54 332 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 DOK1Q99704 481 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 PIMREGQ9BSJ6 248 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 SLC19A3Q9BZV2 496 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 NOX3Q9HBY0 568 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 MRGBPQ9NV56 204 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 SH3GLB1Q9Y371 365 aa13.74□□□□□ -0.21
CRLF3-203ENST00000578692 JMJD1CQ15652 2540 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 TMEM129A0AVI4 362 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 SH3PXD2BA1X283 911 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 KPNA4O00629 521 aaPredicted RBP13.73□□□□□ -0.21
CRLF3-203ENST00000578692 RNF13O43567 381 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 NPPAP01160 153 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 IFNA2P01563 188 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 IGHV4-31P0DP07 118 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 B4GALT1P15291 398 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 NR4A1P22736 598 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 NR4A2P43354 598 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 ARFIP2P53365 341 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 CRYBA2P53672 197 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 RAB1AP62820 205 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 SNTB2Q13425 540 aaKnown RBP13.73□□□□□ -0.21
CRLF3-203ENST00000578692 GGTLC2Q14390 218 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 KRT80Q6KB66 452 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 PODNL1Q6PEZ8 512 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 PIWIL3Q7Z3Z3 882 aaKnown RBP13.73□□□□□ -0.21
CRLF3-203ENST00000578692 CALHM3Q86XJ0 350 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 SVOPLQ8N434 492 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 OR8J3Q8NGG0 315 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 TMEM54Q969K7 222 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 PRSS27Q9BQR3 290 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms