RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 FXNQ16595 210 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 RPS26P11Q5JNZ5 115 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-209ENST00000463631 SHQ1Q6PI26 577 aaKnown RBP14.85□□□□□ -0.03
HMGN1-209ENST00000463631 H1FNTQ75WM6 255 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-209ENST00000463631 NET1Q7Z628 596 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-209ENST00000463631 SLC38A4Q969I6 547 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 LRR1Q96L50 414 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF385DQ9H6B1 395 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 TPT1P8Q9HAU6 139 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 CACYBPQ9HB71 228 aaKnown RBP14.85□□□□□ -0.03
HMGN1-209ENST00000463631 TRAV20A0A0B4J274 112 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 TM9SF1O15321 606 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 RP2O75695 350 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 IL6P05231 212 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 GAAP10253 952 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 EGR1P18146 543 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 GRPRP30550 384 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 CRATP43155 626 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 TRMT5Q32P41 509 aaKnown RBP14.84□□□□□ -0.03
HMGN1-209ENST00000463631 PHYHD1Q5SRE7 291 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 CARM1Q86X55 608 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 C20orf196Q8IYI0 205 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 C3orf56Q8N813 242 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 LSMEM1Q8N8F7 131 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 TAAR8Q969N4 342 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 SLC41A3Q96GZ6 507 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 LRRC37BQ96QE4 947 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 BCL2L10Q9HD36 194 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF224Q9NZL3 707 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 FBXL3Q9UKT7 428 aa14.84□□□□□ -0.03
HMGN1-209ENST00000463631 WNK2Q9Y3S1 2297 aa14.83□□□□□ -0.03
HMGN1-209ENST00000463631 TGP01266 2768 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 IGKV1D-42A0A075B6H8 117 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 TRAV36DV7A0A075B6V5 113 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 TMEM247A6NEH6 219 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 M0R3G1 203 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 NCR1O76036 304 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 PNPP00491 289 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 COL8A2P25067 703 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 LMO4P61968 165 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 MFSD13AQ14CX5 517 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 ZNF311Q5JNZ3 666 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 MSANTD1Q6ZTZ1 278 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 UEVLDQ8IX04 471 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 OR6S1Q8NH40 331 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 GCDHQ92947 438 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-209ENST00000463631 SYT3Q9BQG1 590 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 RBM4Q9BWF3 364 aaKnown RBP14.83□□□□□ -0.04
HMGN1-209ENST00000463631 ZNF416Q9BWM5 594 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 NARFLQ9H6Q4 476 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 ZNF275Q9NSD4 429 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-209ENST00000463631 PNPOQ9NVS9 261 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 KLHL14Q9P2G3 628 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 PCDHB10Q9UN67 800 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 CORINQ9Y5Q5 1042 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 NOX1Q9Y5S8 564 aa14.83□□□□□ -0.04
HMGN1-209ENST00000463631 TRIM77I1YAP6 450 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 WNT9BO14905 357 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 HPRP00739 348 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 CD79AP11912 226 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 BMP2P12643 396 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 IDO1P14902 403 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 EPHA1P21709 976 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 BGNP21810 368 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 ALDH3B1P43353 468 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 HOXC5Q00444 222 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 BST1Q10588 318 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 PDCD4Q53EL6 469 aaKnown RBP14.82□□□□□ -0.04
HMGN1-209ENST00000463631 NHLRC1Q6VVB1 395 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 ZNF813Q6ZN06 617 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 SNX32Q86XE0 403 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 SCAIQ8N9R8 606 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 AENQ8WTP8 325 aaKnown RBP14.82□□□□□ -0.04
HMGN1-209ENST00000463631 DNAJA4Q8WW22 397 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-209ENST00000463631 YIPF5Q969M3 257 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 VPS33AQ96AX1 596 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 JMJD8Q96S16 334 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 LPAR2Q9HBW0 351 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 A4GALTQ9NPC4 353 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 B3GAT2Q9NPZ5 323 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 TREM2Q9NZC2 230 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 MYEF2Q9P2K5 600 aaKnown RBP14.82□□□□□ -0.04
HMGN1-209ENST00000463631 RPS6KB2Q9UBS0 482 aa14.82□□□□□ -0.04
HMGN1-209ENST00000463631 ZNF346Q9UL40 294 aaKnown RBP14.82□□□□□ -0.04
HMGN1-209ENST00000463631 A0A1B0GWA3 101 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 ANP32DO95626 131 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 ETS2P15036 469 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 B4GALT1P15291 398 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 TCN1P20061 433 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-209ENST00000463631 HTR2AP28223 471 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 LIMS1P48059 325 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 GIPRP48546 466 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 SEC24CP53992 1094 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 VSNL1P62760 191 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 GALK2Q01415 458 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 FADDQ13158 208 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 STX3Q13277 289 aa14.81□□□□□ -0.04
HMGN1-209ENST00000463631 MAD2L1BPQ15013 274 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-209ENST00000463631 MMEL1Q495T6 779 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms