RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	RTT103	Q05543	409 aa		0.93	□□□□□ -2.26
snR45	snR45	BSC6	Q08280	497 aa		0.93	□□□□□ -2.26
snR45	snR45	ATG11	Q12527	1178 aa		0.93	□□□□□ -2.26
snR45	snR45	YKL033W-A	Q86ZR7	236 aa		0.93	□□□□□ -2.26
snR45	snR45	TSR4	P25040	408 aa		0.92	□□□□□ -2.26
snR45	snR45	NGG1	P32494	702 aa		0.92	□□□□□ -2.26
snR45	snR45	BEM3	P32873	1128 aa		0.92	□□□□□ -2.26
snR45	snR45	GRS1	P38088	690 aa	Known RBP	0.92	□□□□□ -2.26
snR45	snR45	SAH1	P39954	449 aa	Known RBP	0.92	□□□□□ -2.26
snR45	snR45	HXT16	P47185	567 aa		0.92	□□□□□ -2.26
snR45	snR45	ERG13	P54839	491 aa	Known RBP	0.92	□□□□□ -2.26
snR45	snR45	MRL1	Q06815	381 aa		0.92	□□□□□ -2.26
snR45	snR45	STE12	P13574	688 aa		0.91	□□□□□ -2.26
snR45	snR45	YHR078W	P38799	552 aa		0.91	□□□□□ -2.26
snR45	snR45	YIL108W	P40483	696 aa	Known RBP	0.91	□□□□□ -2.26
snR45	snR45	BAP3	P41815	604 aa		0.91	□□□□□ -2.26
snR45	snR45	YGL260W	P53056	76 aa		0.91	□□□□□ -2.26
snR45	snR45	VPS30	Q02948	557 aa		0.91	□□□□□ -2.26
snR45	snR45	ULA1	Q12059	462 aa		0.91	□□□□□ -2.26
snR45	snR45	MCD1	Q12158	566 aa		0.91	□□□□□ -2.26
snR45	snR45	PRE9	P23638	258 aa	Known RBP	0.9	□□□□□ -2.27
snR45	snR45	RER2	P35196	286 aa		0.9	□□□□□ -2.27
snR45	snR45	MDJ2	P42834	146 aa		0.9	□□□□□ -2.27
snR45	snR45	GYP7	P48365	746 aa		0.9	□□□□□ -2.27
snR45	snR45	SRL1	Q08673	210 aa		0.9	□□□□□ -2.27
snR45	snR45	KCC4	P25389	1037 aa		0.89	□□□□□ -2.27
snR45	snR45	GMH1	P36125	273 aa		0.89	□□□□□ -2.27
snR45	snR45	PCA1	P38360	1216 aa		0.89	□□□□□ -2.27
snR45	snR45	FUB1	P25659	250 aa		0.88	□□□□□ -2.27
snR45	snR45	RPD3	P32561	433 aa		0.88	□□□□□ -2.27
snR45	snR45	YKR078W	P36158	585 aa	Known RBP	0.88	□□□□□ -2.27
snR45	snR45	PMC1	P38929	1173 aa	Predicted RBP	0.88	□□□□□ -2.27
snR45	snR45	AZF1	P41696	914 aa		0.88	□□□□□ -2.27
snR45	snR45	SKP2	P42843	763 aa		0.88	□□□□□ -2.27
snR45	snR45	FCP1	Q03254	732 aa		0.88	□□□□□ -2.27
snR45	snR45	TGL5	Q12043	749 aa		0.88	□□□□□ -2.27
snR45	snR45	FRE7	Q12333	620 aa		0.88	□□□□□ -2.27
snR45	snR45	TUP1	P16649	713 aa		0.87	□□□□□ -2.27
snR45	snR45	CLN2	P20438	545 aa		0.87	□□□□□ -2.27
snR45	snR45	CDC12	P32468	407 aa	Known RBP	0.87	□□□□□ -2.27
snR45	snR45	YMC2	P38087	329 aa		0.87	□□□□□ -2.27
snR45	snR45	YBR238C	P38330	731 aa	Known RBP	0.87	□□□□□ -2.27
snR45	snR45	CCT3	P39077	534 aa	Known RBP	0.87	□□□□□ -2.27
snR45	snR45	MRPS18	P42847	217 aa		0.87	□□□□□ -2.27
snR45	snR45	NMD5	P46970	1048 aa		0.87	□□□□□ -2.27
snR45	snR45	PAN2	P53010	1115 aa	Predicted RBP	0.87	□□□□□ -2.27
snR45	snR45	FHN1	P53279	174 aa		0.87	□□□□□ -2.27
snR45	snR45	AI5_ALPHA	Q9ZZX1	630 aa		0.87	□□□□□ -2.27
snR45	snR45	YLR415C	O13578	112 aa		0.86	□□□□□ -2.27
snR45	snR45	RTT107	P38850	1070 aa		0.86	□□□□□ -2.27
snR45	snR45	OAF1	P39720	1047 aa	Predicted RBP	0.86	□□□□□ -2.27
snR45	snR45	SNO3	P43544	222 aa		0.86	□□□□□ -2.27
snR45	snR45	YKE2	P52553	114 aa		0.86	□□□□□ -2.27
snR45	snR45	ATP23	P53722	227 aa		0.86	□□□□□ -2.27
snR45	snR45	SRP1	Q02821	542 aa	Known RBP	0.86	□□□□□ -2.27
snR45	snR45	GRS2	Q06817	618 aa		0.86	□□□□□ -2.27
snR45	snR45	YPR089W	O13585	888 aa		0.85	□□□□□ -2.27
snR45	snR45	CDC48	P25694	835 aa	Known RBP	0.85	□□□□□ -2.27
snR45	snR45	TYE7	P33122	291 aa	Predicted RBP	0.85	□□□□□ -2.27
snR45	snR45	SFB3	P38810	929 aa		0.85	□□□□□ -2.27
snR45	snR45	PIP2	P52960	996 aa		0.85	□□□□□ -2.27
snR45	snR45	YPL066W	Q12194	479 aa		0.85	□□□□□ -2.27
snR45	snR45	PRS5	Q12265	496 aa	Known RBP	0.85	□□□□□ -2.27
snR45	snR45	GCR1	P07261	785 aa		0.84	□□□□□ -2.27
snR45	snR45	TIF3	P34167	436 aa	Known RBP	0.84	□□□□□ -2.27
snR45	snR45	MIT1	P40002	666 aa		0.84	□□□□□ -2.27
snR45	snR45	ASN1	P49089	572 aa	Known RBP	0.84	□□□□□ -2.27
snR45	snR45	MRPL1	Q04599	285 aa		0.84	□□□□□ -2.27
snR45	snR45	RKM4	Q12504	494 aa		0.84	□□□□□ -2.27
snR45	snR45	CSR2	Q12734	1121 aa		0.84	□□□□□ -2.27
snR45	snR45	PHO5	P00635	467 aa		0.83	□□□□□ -2.28
snR45	snR45	MGM1	P32266	881 aa		0.83	□□□□□ -2.28
snR45	snR45	ATO2	P32907	282 aa		0.83	□□□□□ -2.28
snR45	snR45	PHO11	P35842	467 aa		0.83	□□□□□ -2.28
snR45	snR45	SIC1	P38634	284 aa		0.83	□□□□□ -2.28
snR45	snR45	PHO12	P38693	467 aa		0.83	□□□□□ -2.28
snR45	snR45	PZF1	P39933	429 aa		0.83	□□□□□ -2.28
snR45	snR45	YKR011C	Q02209	353 aa		0.83	□□□□□ -2.28
snR45	snR45	MUS81	Q04149	632 aa	Predicted RBP	0.83	□□□□□ -2.28
snR45	snR45	NRT1	Q08485	598 aa		0.83	□□□□□ -2.28
snR45	snR45	PRP16	P15938	1071 aa	Predicted RBP	0.82	□□□□□ -2.28
snR45	snR45	RAD27	P26793	382 aa		0.82	□□□□□ -2.28
snR45	snR45	ERP5	P38819	212 aa		0.82	□□□□□ -2.28
snR45	snR45	FLO5	P38894	1075 aa		0.82	□□□□□ -2.28
snR45	snR45	DUS1	P53759	423 aa	Known RBP	0.82	□□□□□ -2.28
snR45	snR45	RSC9	Q03124	581 aa		0.82	□□□□□ -2.28
snR45	snR45	ADD37	Q03233	198 aa		0.82	□□□□□ -2.28
snR45	snR45	HER1	Q12276	1246 aa		0.82	□□□□□ -2.28
snR45	snR45	YKL107W	P34251	309 aa		0.81	□□□□□ -2.28
snR45	snR45	FMP46	P36141	133 aa	Known RBP	0.81	□□□□□ -2.28
snR45	snR45	SPC98	P53540	846 aa		0.81	□□□□□ -2.28
snR45	snR45	ENT2	Q05785	613 aa		0.81	□□□□□ -2.28
snR45	snR45	SNA4	Q07549	140 aa		0.81	□□□□□ -2.28
snR45	snR45	YMR230W-A	Q3E7B5	62 aa		0.81	□□□□□ -2.28
snR45	snR45	INO1	P11986	533 aa		0.8	□□□□□ -2.28
snR45	snR45	REV1	P12689	985 aa		0.8	□□□□□ -2.28
snR45	snR45	THR1	P17423	357 aa	Known RBP	0.8	□□□□□ -2.28
snR45	snR45	MVD1	P32377	396 aa	Known RBP	0.8	□□□□□ -2.28
snR45	snR45	DHH1	P39517	506 aa	Known RBP	0.8	□□□□□ -2.28
snR45	snR45	SHE10	P53075	577 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms