RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT3	YPR001W	PCL10	P53124	433 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	TAF11	Q04226	346 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	TY1B-A	O13527	1196 aa	Known RBP	7.36	□□□□□ -1.23
CIT3	YPR001W	DAL7	P21826	554 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	NGG1	P32494	702 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	OAF3	P36023	863 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	RXT2	P38255	430 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	CCZ1	P38273	704 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	IRC6	P43615	237 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	YAP1802	P53309	568 aa		7.36	□□□□□ -1.23
CIT3	YPR001W	BIO5	P53744	561 aa	Known RBP	7.36	□□□□□ -1.23
CIT3	YPR001W	TFA2	P36145	328 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	VRP1	P37370	817 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	SRP72	P38688	640 aa	Known RBP	7.35	□□□□□ -1.23
CIT3	YPR001W	SAW1	P39735	261 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	VHR1	P40522	640 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	LSB6	P42951	607 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	YJL181W	P46987	611 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	YNR065C	P53751	1116 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	SYF1	Q04048	859 aa	Predicted RBP	7.35	□□□□□ -1.23
CIT3	YPR001W	NUR1	Q12066	484 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	ARP7	Q12406	477 aa		7.35	□□□□□ -1.23
CIT3	YPR001W	RPS21B	Q3E754	87 aa	Known RBP	7.35	□□□□□ -1.23
CIT3	YPR001W	RPL11A	P0C0W9	174 aa	Known RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	NAT1	P12945	854 aa	Known RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	MET8	P15807	274 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	MIH1	P23748	554 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	AAD3	P25612	363 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	HSL7	P38274	827 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	LRP1	P38801	184 aa	Known RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	YEL068C	P39977	110 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	RIC1	P40395	1056 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	SBE2	P42223	864 aa	Known RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	UBC9	P50623	157 aa	Predicted RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	ARC35	P53731	342 aa	Known RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	YIG1	Q08956	461 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	SMC6	Q12749	1114 aa		7.34	□□□□□ -1.23
CIT3	YPR001W	RPL11B	Q3E757	174 aa	Predicted RBP	7.34	□□□□□ -1.23
CIT3	YPR001W	SEM1	O94742	89 aa		7.33	□□□□□ -1.24
CIT3	YPR001W	DBP2	P24783	546 aa	Known RBP	7.33	□□□□□ -1.24
CIT3	YPR001W	RPT3	P33298	428 aa	Known RBP	7.33	□□□□□ -1.24
CIT3	YPR001W	DPH1	P40487	425 aa	Known RBP	7.33	□□□□□ -1.24
CIT3	YPR001W	ENV11	P53246	860 aa		7.33	□□□□□ -1.24
CIT3	YPR001W	OMS1	Q06668	471 aa		7.33	□□□□□ -1.24
CIT3	YPR001W	TCB1	Q12466	1186 aa		7.33	□□□□□ -1.24
CIT3	YPR001W	TRK1	P12685	1235 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	PHO3	P24031	467 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	DAL1	P32375	460 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	NPL6	P32832	435 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	APM3	P38153	483 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	ALY2	P47029	1046 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	PTK2	P47116	818 aa	Known RBP	7.32	□□□□□ -1.24
CIT3	YPR001W	TIM10	P87108	93 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	MRPL13	Q02204	264 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	YDR286C	Q05530	114 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	RGA2	Q06407	1009 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	YPL260W	Q08977	551 aa		7.32	□□□□□ -1.24
CIT3	YPR001W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.32	□□□□□ -1.24	not detected
CIT3	YPR001W	MTF2	P10849	440 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	AXL2	P38928	823 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	SPC72	P39723	622 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	UBP9	P39967	754 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	TPA1	P40032	644 aa	Known RBP	7.31	□□□□□ -1.24
CIT3	YPR001W	JEM1	P40358	645 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	YIL092W	P40497	633 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	YCG1	Q06680	1035 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	VHS3	Q08438	674 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	SOG2	Q08817	791 aa		7.31	□□□□□ -1.24
CIT3	YPR001W	YCL049C	P25577	312 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	SEC65	P29478	273 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	NAM7	P30771	971 aa	Known RBP	7.3	□□□□□ -1.24
CIT3	YPR001W	SDS22	P36047	338 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	FAT1	P38225	669 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	AAD14	P42884	376 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	PKH1	Q03407	766 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	VID22	Q05934	901 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	LAP2	Q10740	671 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	HSP42	Q12329	375 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	SNF1	P06782	633 aa	Known RBP	7.3	□□□□□ -1.24
CIT3	YPR001W	ARG82	P07250	355 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	ACE2	P21192	770 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	ATP12	P22135	325 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	NFS1	P25374	497 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	LAM1	P38851	1228 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	CCT3	P39077	534 aa	Known RBP	7.3	□□□□□ -1.24
CIT3	YPR001W	AXL1	P40851	1208 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	SPO74	P45819	413 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	VTC4	P47075	721 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	HRQ1	Q05549	1077 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	ISA1	Q07821	250 aa	Predicted RBP	7.3	□□□□□ -1.24
CIT3	YPR001W	YPL191C	Q08930	360 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	PGC1	Q08959	321 aa		7.3	□□□□□ -1.24
CIT3	YPR001W	RPP1A	P05318	106 aa	Predicted RBP	7.29	□□□□□ -1.24
CIT3	YPR001W	NUC1	P08466	329 aa		7.29	□□□□□ -1.24
CIT3	YPR001W	CDC16	P09798	840 aa		7.29	□□□□□ -1.24
CIT3	YPR001W	RPC53	P25441	422 aa		7.29	□□□□□ -1.24
CIT3	YPR001W	CDC48	P25694	835 aa	Known RBP	7.29	□□□□□ -1.24
CIT3	YPR001W	TSL1	P38427	1098 aa	Known RBP	7.29	□□□□□ -1.24
CIT3	YPR001W	MXR1	P40029	184 aa		7.29	□□□□□ -1.24
CIT3	YPR001W	HXT16	P47185	567 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms