RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	PEP7	P32609	515 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	SKG6	P32900	734 aa	Predicted RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	UBP11	P36026	717 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	MRX3	P38172	270 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	UBS1	P38290	277 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	SAH1	P39954	449 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	BTT1	P40314	149 aa	Predicted RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	RMD8	P43620	662 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	RSM10	Q03201	203 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	SUL2	Q12325	893 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	RLF2	Q12495	606 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	DED1	P06634	604 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	CYM1	P32898	989 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	PGM1	P33401	570 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	PPX1	P38698	397 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	YNG2	P38806	282 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	BIM1	P40013	344 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	YJR061W	P40355	935 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	CLU1	Q03690	1277 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	LEA1	Q08963	238 aa	Predicted RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	PUS1	Q12211	544 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	YIL046W-A	Q3E7Z4	54 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	ADE4	P04046	510 aa	Known RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	GAL4	P04386	881 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	SWE1	P32944	819 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	MNR2	P35724	969 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	GDH3	P39708	457 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	OSW5	P40219	148 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	REF2	P42073	533 aa	Predicted RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	ROM1	P53046	1155 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	ORC4	P54791	529 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	ROD1	Q02805	837 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	PPH22	P23595	377 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	MIA40	P36046	403 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	ECM21	P38167	1117 aa	Known RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	YER186C	P40101	306 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	SIP5	P40210	489 aa	Known RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	GPD2	P41911	440 aa	Known RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	ENT3	P47160	408 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	UTP8	P53276	713 aa	Known RBP	3.36	□□□□□ -1.87
SKP2	YNL311C	YLR456W	Q06199	204 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	YPR148C	Q06523	435 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	REC8	Q12188	680 aa		3.36	□□□□□ -1.87
SKP2	YNL311C	UTP20	P35194	2493 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	GAL80	P04387	435 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	HCA4	P20448	770 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	PRP22	P24384	1145 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	CCR4	P31384	837 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
SKP2	YNL311C	FYV8	P46949	817 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	SPC98	P53540	846 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	TDA7	P53882	636 aa	Predicted RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	SUR7	P54003	302 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	HOS3	Q02959	697 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	EST2	Q06163	884 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	ECM7	Q06200	448 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	YCG1	Q06680	1035 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	ESS1	P22696	170 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	RAD16	P31244	790 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	ERV46	P39727	415 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	YIR007W	P40566	764 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	YGL081W	P53156	320 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	ALG11	P53954	548 aa	Known RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	EEB1	Q02891	456 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	SPN1	Q06505	410 aa	Predicted RBP	3.35	□□□□□ -1.87
SKP2	YNL311C	PNS1	Q12412	539 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	YPR015C	Q12531	247 aa		3.35	□□□□□ -1.87
SKP2	YNL311C	CIT2	P08679	460 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	PDR1	P12383	1068 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	REV1	P12689	985 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	KIN3	P22209	435 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	ERG6	P25087	383 aa	Known RBP	3.34	□□□□□ -1.87
SKP2	YNL311C	MET4	P32389	672 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	WSC4	P38739	605 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	CRG1	P38892	291 aa	RIP-Chip data	3.34	□□□□□ -1.87	not detected
SKP2	YNL311C	CCT3	P39077	534 aa	Known RBP	3.34	□□□□□ -1.87
SKP2	YNL311C	UBP5	P39944	805 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	FIS1	P40515	155 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	VPS70	P47161	811 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	MNP1	P53163	194 aa	Predicted RBP	3.34	□□□□□ -1.87
SKP2	YNL311C	BSP1	Q06604	576 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	YDL057W	Q07379	328 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	ALR1	Q08269	859 aa		3.34	□□□□□ -1.87
SKP2	YNL311C	COX4	P04037	155 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	SPO11	P23179	398 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	TSA1	P34760	196 aa	Known RBP	3.33	□□□□□ -1.88
SKP2	YNL311C	FET5	P43561	622 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	ASE1	P50275	885 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	NRM1	P53718	249 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	YDR090C	Q03193	310 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	OXR1	Q08952	273 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	YPQ1	Q12010	308 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	MET6	P05694	767 aa	Known RBP	3.33	□□□□□ -1.88
SKP2	YNL311C	ATG19	P35193	415 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	YKL050C	P35736	922 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	YKR051W	P36142	418 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	SUM1	P46676	1062 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	BDP1	P46678	594 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	YNR065C	P53751	1116 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	TOF2	Q02208	771 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms