RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	ATG17	Q06410	417 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	NOC3	Q07896	663 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	INP54	Q08227	384 aa	Known RBP	4.22	□□□□□ -1.73
ATG2	YNL242W	HAT1	Q12341	374 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	WHI5	Q12416	295 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	DPH6	Q12429	685 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	LSO1	Q3E827	93 aa		4.22	□□□□□ -1.73
ATG2	YNL242W	VPS35	P34110	944 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	MUM2	P38236	366 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	MDJ2	P42834	146 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	YJR039W	P47107	1121 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	ARI1	P53111	347 aa	Known RBP	4.21	□□□□□ -1.73
ATG2	YNL242W	INP2	Q03824	705 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	JIP5	Q06214	492 aa	Predicted RBP	4.21	□□□□□ -1.73
ATG2	YNL242W	MAG2	Q06436	670 aa	Known RBP	4.21	□□□□□ -1.73
ATG2	YNL242W	YPL191C	Q08930	360 aa		4.21	□□□□□ -1.73
ATG2	YNL242W	ENO1	P00924	437 aa	Known RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	COQ1	P18900	473 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	ICL1	P28240	557 aa	Predicted RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	PET10	P36139	283 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	CDC27	P38042	758 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	RXT2	P38255	430 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	BCD1	P38772	366 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	AXL1	P40851	1208 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	SLU7	Q02775	382 aa	Known RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	YPR078C	Q06813	372 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	VHS3	Q08438	674 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	BRR1	Q99177	341 aa	Predicted RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	NAT1	P12945	854 aa	Known RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	ATO2	P32907	282 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	PXL1	P36166	706 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	YBL036C	P38197	257 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	YBL028C	P38202	106 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	OCA1	P50946	238 aa	Predicted RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	LSG1	P53145	640 aa	Known RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	ACL4	Q03771	387 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	DAS2	Q12084	232 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	SLX4	Q12098	748 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	POL4	P25615	582 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	YLF2	P38746	405 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	PET100	P38958	111 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	SHE10	P53075	577 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	RIO1	Q12196	484 aa	Known RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	TIP41	Q12199	356 aa		4.21	□□□□□ -1.74
ATG2	YNL242W	NOT5	Q12514	560 aa	Predicted RBP	4.21	□□□□□ -1.74
ATG2	YNL242W	APC1	P53886	1748 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	DUR1,2	P32528	1835 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	OSM1	P21375	501 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	SMY1	P32364	656 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	EMW1	P42842	904 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	YNL247W	P53852	767 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	FAP1	P53971	965 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	UBP2	Q01476	1272 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	YPL260W	Q08977	551 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	MAM3	Q12296	706 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	CIT1	P00890	479 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	PYC1	P11154	1178 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	CLB3	P24870	427 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	AAD3	P25612	363 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	STB1	P42845	420 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	MET6	P05694	767 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	SSB1	P11484	613 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	SEC63	P14906	663 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	THR4	P16120	514 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	PEX5	P35056	612 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	YKL023W	P36103	277 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	ERG7	P38604	731 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	TRM5	P38793	499 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	VPS45	P38932	577 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	SSB2	P40150	613 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	BNI4	P53858	892 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	PPM2	Q08282	695 aa		4.2	□□□□□ -1.74
ATG2	YNL242W	SGT2	Q12118	346 aa	Known RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	CLF1	Q12309	687 aa	Predicted RBP	4.2	□□□□□ -1.74
ATG2	YNL242W	NUC1	P08466	329 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	CLN3	P13365	580 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	SPS22	P25380	463 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	RAM2	P29703	316 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	GCG1	P32656	232 aa	Known RBP	4.19	□□□□□ -1.74
ATG2	YNL242W	YKL050C	P35736	922 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	TDA3	P38758	523 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	ALG5	P40350	334 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	YKR005C	Q02203	525 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	SPO71	Q03868	1245 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	MSH5	Q12175	901 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	RAD61	Q99359	647 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	CLN1	P20437	546 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	SEC21	P32074	935 aa	Known RBP	4.19	□□□□□ -1.74
ATG2	YNL242W	PEP7	P32609	515 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	YME1	P32795	747 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	PPS1	P38148	807 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	UBP13	P38187	747 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	ATG14	P38270	344 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	MDM1	Q01846	1127 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	NSE1	Q07913	336 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	SIL1	Q08199	421 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	SPO21	Q12411	609 aa		4.19	□□□□□ -1.74
ATG2	YNL242W	CMD1	P06787	147 aa	Known RBP	4.19	□□□□□ -1.74
ATG2	YNL242W	ERG11	P10614	530 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms