RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A DOM34P33309 386 aa4.83□□□□□ -1.64
YSF3YNL138W-A YKR078WP36158 585 aaKnown RBP4.83□□□□□ -1.64
YSF3YNL138W-A NIT1P40447 199 aa4.83□□□□□ -1.64
YSF3YNL138W-A GCV2P49095 1034 aa4.83□□□□□ -1.64
YSF3YNL138W-A PRP43P53131 767 aaKnown RBP4.83□□□□□ -1.64
YSF3YNL138W-A CDA1Q06702 301 aa4.83□□□□□ -1.64
YSF3YNL138W-A BUD21Q08492 214 aaPredicted RBP4.83□□□□□ -1.64
YSF3YNL138W-A RPS13P05756 151 aaKnown RBP4.82□□□□□ -1.64
YSF3YNL138W-A TOM70P07213 617 aaKnown RBP4.82□□□□□ -1.64
YSF3YNL138W-A PRP45P28004 379 aaPredicted RBP4.82□□□□□ -1.64
YSF3YNL138W-A ELM1P32801 640 aa4.82□□□□□ -1.64
YSF3YNL138W-A REC104P33323 182 aa4.82□□□□□ -1.64
YSF3YNL138W-A NUP82P40368 713 aa4.82□□□□□ -1.64
YSF3YNL138W-A MND2P40577 368 aa4.82□□□□□ -1.64
YSF3YNL138W-A UBP6P43593 499 aaKnown RBP4.82□□□□□ -1.64
YSF3YNL138W-A YKE2P52553 114 aa4.82□□□□□ -1.64
YSF3YNL138W-A GCN5Q03330 439 aa4.82□□□□□ -1.64
YSF3YNL138W-A YDR132CQ03900 495 aa4.82□□□□□ -1.64
YSF3YNL138W-A DUS4Q06063 367 aa4.82□□□□□ -1.64
YSF3YNL138W-A YBR238CP38330 731 aaKnown RBP4.81□□□□□ -1.64
YSF3YNL138W-A CHZ1P40019 153 aaPredicted RBP4.81□□□□□ -1.64
YSF3YNL138W-A CCM1P48237 864 aaPredicted RBP4.81□□□□□ -1.64
YSF3YNL138W-A SPT20P50875 604 aa4.81□□□□□ -1.64
YSF3YNL138W-A YGR012WP53206 393 aa4.81□□□□□ -1.64
YSF3YNL138W-A TPO1Q07824 586 aa4.81□□□□□ -1.64
YSF3YNL138W-A PSK1P31374 1356 aa4.8□□□□□ -1.64
YSF3YNL138W-A YRF1-3P0CX14 1859 aa4.8□□□□□ -1.64
YSF3YNL138W-A YRF1-7P0CX15 1859 aa4.8□□□□□ -1.64
YSF3YNL138W-A YRF1-6P53819 1859 aa4.8□□□□□ -1.64
YSF3YNL138W-A SOD2P00447 233 aa4.8□□□□□ -1.64
YSF3YNL138W-A NOT3P06102 836 aaKnown RBP4.8□□□□□ -1.64
YSF3YNL138W-A HSF1P10961 833 aa4.8□□□□□ -1.64
YSF3YNL138W-A IRC24P40580 263 aa4.8□□□□□ -1.64
YSF3YNL138W-A RIM8P53179 542 aa4.8□□□□□ -1.64
YSF3YNL138W-A GPB1Q08886 897 aa4.8□□□□□ -1.64
YSF3YNL138W-A CDC6P09119 513 aa4.79□□□□□ -1.64
YSF3YNL138W-A PRP6P19735 899 aaPredicted RBP4.79□□□□□ -1.64
YSF3YNL138W-A RPC82P32349 654 aa4.79□□□□□ -1.64
YSF3YNL138W-A TOD6P34219 525 aa4.79□□□□□ -1.64
YSF3YNL138W-A POA1P38218 177 aa4.79□□□□□ -1.64
YSF3YNL138W-A PBP1P53297 722 aaKnown RBP4.79□□□□□ -1.64
YSF3YNL138W-A FPR4Q06205 392 aaPredicted RBP4.79□□□□□ -1.64
YSF3YNL138W-A ENV7Q12003 364 aa4.79□□□□□ -1.64
YSF3YNL138W-A SPE1P08432 466 aa4.78□□□□□ -1.64
YSF3YNL138W-A EMC1P25574 760 aa4.78□□□□□ -1.64
YSF3YNL138W-A CDC20P26309 610 aa4.78□□□□□ -1.64
YSF3YNL138W-A THI80P35202 319 aa4.78□□□□□ -1.64
YSF3YNL138W-A YAP6Q03935 383 aa4.78□□□□□ -1.64
YSF3YNL138W-A RXT3Q07458 294 aa4.78□□□□□ -1.64
YSF3YNL138W-A WHI4Q07655 649 aaKnown RBP4.78□□□□□ -1.64
YSF3YNL138W-A ADY3Q07732 790 aa4.78□□□□□ -1.64
YSF3YNL138W-A HMI1Q12039 706 aa4.78□□□□□ -1.64
YSF3YNL138W-A VPS13Q07878 3144 aa4.78□□□□□ -1.64
YSF3YNL138W-A PHR1P05066 565 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
YSF3YNL138W-A PHO8P11491 566 aa4.77□□□□□ -1.65
YSF3YNL138W-A RFA1P22336 621 aaKnown RBP4.77□□□□□ -1.65
YSF3YNL138W-A RPD3P32561 433 aa4.77□□□□□ -1.65
YSF3YNL138W-A STE13P33894 931 aa4.77□□□□□ -1.65
YSF3YNL138W-A GYP8P43570 497 aa4.77□□□□□ -1.65
YSF3YNL138W-A ALG2P43636 503 aa4.77□□□□□ -1.65
YSF3YNL138W-A EAF6P47128 113 aa4.77□□□□□ -1.65
YSF3YNL138W-A PSP2P50109 593 aaKnown RBP4.77□□□□□ -1.65
YSF3YNL138W-A RAI1P53063 387 aaKnown RBP4.77□□□□□ -1.65
YSF3YNL138W-A VPS62P53285 467 aa4.77□□□□□ -1.65
YSF3YNL138W-A SSL1Q04673 461 aaPredicted RBP4.77□□□□□ -1.65
YSF3YNL138W-A ACK1Q07622 623 aaPredicted RBP4.77□□□□□ -1.65
YSF3YNL138W-A ROM2P51862 1356 aaKnown RBP4.77□□□□□ -1.65
YSF3YNL138W-A SCT1P32784 759 aa4.76□□□□□ -1.65
YSF3YNL138W-A GDH3P39708 457 aa4.76□□□□□ -1.65
YSF3YNL138W-A UBP5P39944 805 aa4.76□□□□□ -1.65
YSF3YNL138W-A CEP3P40969 608 aa4.76□□□□□ -1.65
YSF3YNL138W-A OSW7P43611 510 aa4.76□□□□□ -1.65
YSF3YNL138W-A MET12P46151 657 aa4.76□□□□□ -1.65
YSF3YNL138W-A HSV2P50079 448 aaPredicted RBP4.76□□□□□ -1.65
YSF3YNL138W-A RNH70P53331 553 aa4.76□□□□□ -1.65
YSF3YNL138W-A YGR283CP53336 341 aaPredicted RBP4.76□□□□□ -1.65
YSF3YNL138W-A DUS1P53759 423 aaKnown RBP4.76□□□□□ -1.65
YSF3YNL138W-A RSF2P46974 1380 aa4.76□□□□□ -1.65
YSF3YNL138W-A MPH2P0CD99 609 aa4.75□□□□□ -1.65
YSF3YNL138W-A MAL11P53048 616 aa4.75□□□□□ -1.65
YSF3YNL138W-A HDA1P53973 706 aa4.75□□□□□ -1.65
YSF3YNL138W-A YLR125WQ12138 136 aa4.75□□□□□ -1.65
YSF3YNL138W-A RAD9P14737 1309 aa4.74□□□□□ -1.65
YSF3YNL138W-A HIS5P07172 385 aa4.74□□□□□ -1.65
YSF3YNL138W-A RAD53P22216 821 aa4.74□□□□□ -1.65
YSF3YNL138W-A URA1P28272 314 aaPredicted RBP4.74□□□□□ -1.65
YSF3YNL138W-A THI4P32318 326 aa4.74□□□□□ -1.65
YSF3YNL138W-A EMC3P36039 253 aa4.74□□□□□ -1.65
YSF3YNL138W-A PRE10P21242 288 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
YSF3YNL138W-A DAL7P21826 554 aa4.73□□□□□ -1.65
YSF3YNL138W-A PPG1P32838 368 aa4.73□□□□□ -1.65
YSF3YNL138W-A TAF5P38129 798 aa4.73□□□□□ -1.65
YSF3YNL138W-A PLB1P39105 664 aa4.73□□□□□ -1.65
YSF3YNL138W-A YIL108WP40483 696 aaKnown RBP4.73□□□□□ -1.65
YSF3YNL138W-A CHA4P43634 648 aa4.73□□□□□ -1.65
YSF3YNL138W-A NIT3P49954 291 aa4.73□□□□□ -1.65
YSF3YNL138W-A SQS1P53866 767 aaKnown RBP4.73□□□□□ -1.65
YSF3YNL138W-A VPS30Q02948 557 aa4.73□□□□□ -1.65
YSF3YNL138W-A YLR224WQ05947 369 aa4.73□□□□□ -1.65
YSF3YNL138W-A RPS9AO13516 197 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms