RNA–Protein interactions for RNA: YMR063W

RIM9, Transcript of Plasma membrane protein of unknown function, yeast

Gene RIM9, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM9	YMR063W	SGD1	Q06132	899 aa		4.1	□□□□□ -1.75
RIM9	YMR063W	EDE1	P34216	1381 aa		4.1	□□□□□ -1.75
RIM9	YMR063W	LEU2	P04173	364 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	CAN1	P04817	590 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	RPS24A	P0CX31	135 aa	Known RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	RPS24B	P0CX32	135 aa	Known RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	TIM23	P32897	222 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	ECM21	P38167	1117 aa	Known RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	LAM1	P38851	1228 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	NPR2	P39923	615 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	SIT1	P39980	628 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	CHZ1	P40019	153 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	ZRG8	P40021	1076 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	HUL4	P40985	892 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	GYP7	P48365	746 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	ENV11	P53246	860 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	BUL2	Q03758	920 aa	Known RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	SIZ1	Q04195	904 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	YDL124W	Q07551	312 aa	Known RBP	4.09	□□□□□ -1.75
RIM9	YMR063W	PPM2	Q08282	695 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	YPL277C	Q08989	487 aa		4.09	□□□□□ -1.75
RIM9	YMR063W	TOM1	Q03280	3268 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	SIR4	P11978	1358 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	GAL11	P19659	1081 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	CDC11	P32458	415 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	YKR075C	P36155	307 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
RIM9	YMR063W	RPS13	P05756	151 aa	Known RBP	4.07	□□□□□ -1.76
RIM9	YMR063W	TOM70	P07213	617 aa	Known RBP	4.07	□□□□□ -1.76
RIM9	YMR063W	CIT2	P08679	460 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	CDC48	P25694	835 aa	Known RBP	4.07	□□□□□ -1.76
RIM9	YMR063W	PET10	P36139	283 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	MND2	P40577	368 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	SPT20	P50875	604 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	ORC1	P54784	914 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM9	YMR063W	GCN5	Q03330	439 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	RPN4	Q03465	531 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	LCD1	Q04377	747 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	CDA1	Q06702	301 aa		4.07	□□□□□ -1.76
RIM9	YMR063W	UTP10	P42945	1769 aa	Known RBP	4.07	□□□□□ -1.76
RIM9	YMR063W	ELM1	P32801	640 aa		4.06	□□□□□ -1.76
RIM9	YMR063W	BUD6	P41697	788 aa		4.06	□□□□□ -1.76
RIM9	YMR063W	RPN11	P43588	306 aa	Known RBP	4.06	□□□□□ -1.76
RIM9	YMR063W	UBP6	P43593	499 aa	Known RBP	4.06	□□□□□ -1.76
RIM9	YMR063W	YGR012W	P53206	393 aa		4.06	□□□□□ -1.76
RIM9	YMR063W	YDR132C	Q03900	495 aa		4.06	□□□□□ -1.76
RIM9	YMR063W	TPO1	Q07824	586 aa		4.06	□□□□□ -1.76
RIM9	YMR063W	YRF1-4	O13559	1382 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	MHP1	P43638	1398 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	NOT3	P06102	836 aa	Known RBP	4.05	□□□□□ -1.76
RIM9	YMR063W	YEF3	P16521	1044 aa	Known RBP	4.05	□□□□□ -1.76
RIM9	YMR063W	EMC1	P25574	760 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	DOM34	P33309	386 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	REC104	P33323	182 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	TOD6	P34219	525 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	YKR078W	P36158	585 aa	Known RBP	4.05	□□□□□ -1.76
RIM9	YMR063W	GGA2	P38817	585 aa	Known RBP	4.05	□□□□□ -1.76
RIM9	YMR063W	NUP82	P40368	713 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	NIT1	P40447	199 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	TAP42	Q04372	366 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	DUS4	Q06063	367 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	WHI4	Q07655	649 aa	Known RBP	4.05	□□□□□ -1.76
RIM9	YMR063W	GPB1	Q08886	897 aa		4.05	□□□□□ -1.76
RIM9	YMR063W	HSF1	P10961	833 aa		4.04	□□□□□ -1.76
RIM9	YMR063W	RPD3	P32561	433 aa		4.04	□□□□□ -1.76
RIM9	YMR063W	CCM1	P48237	864 aa	Predicted RBP	4.04	□□□□□ -1.76
RIM9	YMR063W	LYS4	P49367	693 aa	Predicted RBP	4.04	□□□□□ -1.76
RIM9	YMR063W	YKE2	P52553	114 aa		4.04	□□□□□ -1.76
RIM9	YMR063W	RIM8	P53179	542 aa		4.04	□□□□□ -1.76
RIM9	YMR063W	YAP6	Q03935	383 aa		4.04	□□□□□ -1.76
RIM9	YMR063W	RPO41	P13433	1351 aa	Known RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	SEC3	P33332	1336 aa	Known RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	SOD2	P00447	233 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	SPE1	P08432	466 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	CDC6	P09119	513 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	PRP6	P19735	899 aa	Predicted RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	RFA1	P22336	621 aa	Known RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	YKL133C	P36066	463 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	POA1	P38218	177 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	GYP8	P43570	497 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	RAI1	P53063	387 aa	Known RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	ADE16	P54113	591 aa	Known RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	SSL1	Q04673	461 aa	Predicted RBP	4.03	□□□□□ -1.76
RIM9	YMR063W	RXT3	Q07458	294 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	ENV7	Q12003	364 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	HMI1	Q12039	706 aa		4.03	□□□□□ -1.76
RIM9	YMR063W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
RIM9	YMR063W	PHO8	P11491	566 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	CDC20	P26309	610 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	THI80	P35202	319 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	YBR238C	P38330	731 aa	Known RBP	4.02	□□□□□ -1.77
RIM9	YMR063W	CEP3	P40969	608 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	PBP1	P53297	722 aa	Known RBP	4.02	□□□□□ -1.77
RIM9	YMR063W	HIM1	Q06674	414 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	ACK1	Q07622	623 aa	Predicted RBP	4.02	□□□□□ -1.77
RIM9	YMR063W	ADY3	Q07732	790 aa		4.02	□□□□□ -1.77
RIM9	YMR063W	RPC82	P32349	654 aa		4.01	□□□□□ -1.77
RIM9	YMR063W	STE13	P33894	931 aa		4.01	□□□□□ -1.77
RIM9	YMR063W	UBP5	P39944	805 aa		4.01	□□□□□ -1.77
RIM9	YMR063W	IRC24	P40580	263 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms