RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YMR206WQ03695 313 aa3.95□□□□□ -1.78
CTK3YML112W DLT1Q04216 342 aa3.95□□□□□ -1.78
CTK3YML112W PPR1P07272 904 aaPredicted RBP3.94□□□□□ -1.78
CTK3YML112W MET3P08536 511 aa3.94□□□□□ -1.78
CTK3YML112W GAL11P19659 1081 aa3.94□□□□□ -1.78
CTK3YML112W SAK1P38990 1142 aa3.94□□□□□ -1.78
CTK3YML112W UBA2P52488 636 aa3.94□□□□□ -1.78
CTK3YML112W MRPS35P53292 345 aa3.94□□□□□ -1.78
CTK3YML112W PKH1Q03407 766 aa3.94□□□□□ -1.78
CTK3YML112W MUS81Q04149 632 aaPredicted RBP3.94□□□□□ -1.78
CTK3YML112W REH1Q06709 432 aa3.94□□□□□ -1.78
CTK3YML112W CAF20P12962 161 aaKnown RBP3.93□□□□□ -1.78
CTK3YML112W NGG1P32494 702 aa3.93□□□□□ -1.78
CTK3YML112W ELO3P40319 345 aa3.93□□□□□ -1.78
CTK3YML112W ATP25Q03153 612 aa3.93□□□□□ -1.78
CTK3YML112W RSC3Q06639 885 aa3.93□□□□□ -1.78
CTK3YML112W MET7Q08645 548 aa3.93□□□□□ -1.78
CTK3YML112W FRE5Q08908 694 aa3.93□□□□□ -1.78
CTK3YML112W ACF2Q12168 779 aa3.93□□□□□ -1.78
CTK3YML112W YOR131CQ12486 218 aa3.93□□□□□ -1.78
CTK3YML112W YOL098CQ12496 1037 aa3.93□□□□□ -1.78
CTK3YML112W SRP40P32583 406 aaPredicted RBP3.92□□□□□ -1.78
CTK3YML112W SPC29P33419 253 aa3.92□□□□□ -1.78
CTK3YML112W SET5P38890 526 aaKnown RBP3.92□□□□□ -1.78
CTK3YML112W CHZ1P40019 153 aaPredicted RBP3.92□□□□□ -1.78
CTK3YML112W ZDS1P50111 915 aaKnown RBP3.92□□□□□ -1.78
CTK3YML112W MUP1P50276 574 aa3.92□□□□□ -1.78
CTK3YML112W MCH5Q08777 521 aa3.92□□□□□ -1.78
CTK3YML112W THI21Q08975 551 aa3.92□□□□□ -1.78
CTK3YML112W YLR415CO13578 112 aa3.91□□□□□ -1.78
CTK3YML112W PPS1P38148 807 aa3.91□□□□□ -1.78
CTK3YML112W RLP7P40693 322 aaKnown RBP3.91□□□□□ -1.78
CTK3YML112W SHR5P41912 237 aa3.91□□□□□ -1.78
CTK3YML112W TY4A-JP47023 414 aa3.91□□□□□ -1.78
CTK3YML112W MUK1Q02866 612 aa3.91□□□□□ -1.78
CTK3YML112W TMN2Q04562 672 aa3.91□□□□□ -1.78
CTK3YML112W ADY4Q05955 493 aa3.91□□□□□ -1.78
CTK3YML112W OMS1Q06668 471 aa3.91□□□□□ -1.78
CTK3YML112W YBR182C-AQ8TGU6 64 aa3.91□□□□□ -1.78
CTK3YML112W DIF1O13577 133 aa3.9□□□□□ -1.79
CTK3YML112W PER1P25625 357 aa3.9□□□□□ -1.79
CTK3YML112W GDH3P39708 457 aa3.9□□□□□ -1.79
CTK3YML112W PFA3P42836 336 aa3.9□□□□□ -1.79
CTK3YML112W HXT16P47185 567 aa3.9□□□□□ -1.79
CTK3YML112W AMA1P50082 593 aa3.9□□□□□ -1.79
CTK3YML112W TIM44Q01852 431 aa3.9□□□□□ -1.79
CTK3YML112W NRG1Q03125 231 aa3.9□□□□□ -1.79
CTK3YML112W MTR3P48240 250 aaPredicted RBP3.89□□□□□ -1.79
CTK3YML112W HSV2P50079 448 aaPredicted RBP3.89□□□□□ -1.79
CTK3YML112W ZIP2P53061 704 aa3.89□□□□□ -1.79
CTK3YML112W ERR1P0CX10 437 aa3.88□□□□□ -1.79
CTK3YML112W ERR2P0CX11 437 aa3.88□□□□□ -1.79
CTK3YML112W YKL091CP33324 310 aaKnown RBP3.88□□□□□ -1.79
CTK3YML112W YBR053CP38235 358 aa3.88□□□□□ -1.79
CTK3YML112W YIR042CP40586 236 aa3.88□□□□□ -1.79
CTK3YML112W ALY2P47029 1046 aa3.88□□□□□ -1.79
CTK3YML112W ASM4Q05166 528 aa3.88□□□□□ -1.79
CTK3YML112W CRR1Q05790 422 aa3.88□□□□□ -1.79
CTK3YML112W OCA5P38738 679 aa3.87□□□□□ -1.79
CTK3YML112W STU2P46675 888 aa3.87□□□□□ -1.79
CTK3YML112W YJL163CP46996 555 aa3.87□□□□□ -1.79
CTK3YML112W DAS1P47005 663 aa3.87□□□□□ -1.79
CTK3YML112W RPN4Q03465 531 aa3.87□□□□□ -1.79
CTK3YML112W TGL5Q12043 749 aa3.87□□□□□ -1.79
CTK3YML112W GPR1Q12361 961 aa3.87□□□□□ -1.79
CTK3YML112W MTC2P34246 357 aa3.86□□□□□ -1.79
CTK3YML112W YBR259WP38338 688 aa3.86□□□□□ -1.79
CTK3YML112W YHL017WP38745 532 aa3.86□□□□□ -1.79
CTK3YML112W MAL11P53048 616 aa3.86□□□□□ -1.79
CTK3YML112W GND2P53319 492 aa3.86□□□□□ -1.79
CTK3YML112W HBT1Q07653 1046 aaKnown RBP3.86□□□□□ -1.79
CTK3YML112W IRC10Q08118 586 aa3.86□□□□□ -1.79
CTK3YML112W LAT1P12695 482 aaKnown RBP3.85□□□□□ -1.79
CTK3YML112W TIM23P32897 222 aa3.85□□□□□ -1.79
CTK3YML112W MTH1P35198 433 aa3.85□□□□□ -1.79
CTK3YML112W SPC42P36094 363 aa3.85□□□□□ -1.79
CTK3YML112W PBP2P38151 413 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
CTK3YML112W BUD6P41697 788 aa3.85□□□□□ -1.79
CTK3YML112W IRC13Q08630 104 aa3.85□□□□□ -1.79
CTK3YML112W HIS7P33734 552 aaKnown RBP3.84□□□□□ -1.79
CTK3YML112W MCD4P36051 919 aa3.84□□□□□ -1.79
CTK3YML112W SIC1P38634 284 aa3.84□□□□□ -1.79
CTK3YML112W NUP82P40368 713 aa3.84□□□□□ -1.79
CTK3YML112W QRI1P43123 477 aaKnown RBP3.84□□□□□ -1.79
CTK3YML112W YBP2P53169 641 aa3.84□□□□□ -1.79
CTK3YML112W YDR338CQ05497 695 aa3.84□□□□□ -1.79
CTK3YML112W ATG11Q12527 1178 aa3.84□□□□□ -1.79
CTK3YML112W MDM12Q92328 271 aa3.84□□□□□ -1.79
CTK3YML112W CDC9P04819 755 aa3.83□□□□□ -1.8
CTK3YML112W STO1P34160 861 aaKnown RBP3.83□□□□□ -1.8
CTK3YML112W RPN10P38886 268 aaKnown RBP3.83□□□□□ -1.8
CTK3YML112W HOS4P40480 1083 aa3.83□□□□□ -1.8
CTK3YML112W SDS3P40505 327 aa3.83□□□□□ -1.8
CTK3YML112W CAF16P43569 289 aa3.83□□□□□ -1.8
CTK3YML112W TEX1P53851 422 aaKnown RBP3.83□□□□□ -1.8
CTK3YML112W RIA1P53893 1110 aa3.83□□□□□ -1.8
CTK3YML112W PCL5P38794 229 aa3.82□□□□□ -1.8
CTK3YML112W YFL052WP43551 465 aa3.82□□□□□ -1.8
CTK3YML112W BNA2P47125 453 aa3.82□□□□□ -1.8
CTK3YML112W PRP31P49704 494 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms