RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	PER1	P25625	357 aa		4.14	□□□□□ -1.75
BER1	YLR412W	SPC29	P33419	253 aa		4.14	□□□□□ -1.75
BER1	YLR412W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
BER1	YLR412W	SAK1	P38990	1142 aa		4.14	□□□□□ -1.75
BER1	YLR412W	GDH3	P39708	457 aa		4.14	□□□□□ -1.75
BER1	YLR412W	SSY5	P47002	699 aa		4.14	□□□□□ -1.75
BER1	YLR412W	TY4A-J	P47023	414 aa		4.14	□□□□□ -1.75
BER1	YLR412W	ATP25	Q03153	612 aa		4.14	□□□□□ -1.75
BER1	YLR412W	RPN4	Q03465	531 aa		4.14	□□□□□ -1.75
BER1	YLR412W	YOL073C	Q08232	322 aa		4.14	□□□□□ -1.75
BER1	YLR412W	TIM23	P32897	222 aa		4.13	□□□□□ -1.75
BER1	YLR412W	RPP1	P38786	293 aa		4.13	□□□□□ -1.75
BER1	YLR412W	SET5	P38890	526 aa	Known RBP	4.13	□□□□□ -1.75
BER1	YLR412W	PZF1	P39933	429 aa		4.13	□□□□□ -1.75
BER1	YLR412W	FKH2	P41813	862 aa		4.13	□□□□□ -1.75
BER1	YLR412W	HSV2	P50079	448 aa	Predicted RBP	4.13	□□□□□ -1.75
BER1	YLR412W	ASI2	P53895	289 aa		4.13	□□□□□ -1.75
BER1	YLR412W	PKH1	Q03407	766 aa		4.13	□□□□□ -1.75
BER1	YLR412W	MUS81	Q04149	632 aa	Predicted RBP	4.13	□□□□□ -1.75
BER1	YLR412W	MOH1	P38191	138 aa		4.12	□□□□□ -1.75
BER1	YLR412W	BUD6	P41697	788 aa		4.12	□□□□□ -1.75
BER1	YLR412W	SHR5	P41912	237 aa		4.12	□□□□□ -1.75
BER1	YLR412W	MRPS35	P53292	345 aa		4.12	□□□□□ -1.75
BER1	YLR412W	RNT1	Q02555	471 aa		4.12	□□□□□ -1.75
BER1	YLR412W	RSC3	Q06639	885 aa		4.12	□□□□□ -1.75
BER1	YLR412W	THI21	Q08975	551 aa		4.12	□□□□□ -1.75
BER1	YLR412W	YBR182C-A	Q8TGU6	64 aa		4.12	□□□□□ -1.75
BER1	YLR412W	ALG7	P07286	448 aa		4.11	□□□□□ -1.75
BER1	YLR412W	OAR1	P35731	278 aa		4.11	□□□□□ -1.75
BER1	YLR412W	NUP82	P40368	713 aa		4.11	□□□□□ -1.75
BER1	YLR412W	RLP7	P40693	322 aa	Known RBP	4.11	□□□□□ -1.75
BER1	YLR412W	SNM1	P40993	198 aa		4.11	□□□□□ -1.75
BER1	YLR412W	HXT16	P47185	567 aa		4.11	□□□□□ -1.75
BER1	YLR412W	ZDS1	P50111	915 aa	Known RBP	4.11	□□□□□ -1.75
BER1	YLR412W	MAL11	P53048	616 aa		4.11	□□□□□ -1.75
BER1	YLR412W	YMR206W	Q03695	313 aa		4.11	□□□□□ -1.75
BER1	YLR412W	DIF1	O13577	133 aa		4.1	□□□□□ -1.75
BER1	YLR412W	MET3	P08536	511 aa		4.1	□□□□□ -1.75
BER1	YLR412W	NGG1	P32494	702 aa		4.1	□□□□□ -1.75
BER1	YLR412W	ELO3	P40319	345 aa		4.1	□□□□□ -1.75
BER1	YLR412W	PFA3	P42836	336 aa		4.1	□□□□□ -1.75
BER1	YLR412W	ALY2	P47029	1046 aa		4.1	□□□□□ -1.75
BER1	YLR412W	DLT1	Q04216	342 aa		4.1	□□□□□ -1.75
BER1	YLR412W	CRR1	Q05790	422 aa		4.1	□□□□□ -1.75
BER1	YLR412W	YLR415C	O13578	112 aa		4.09	□□□□□ -1.75
BER1	YLR412W	PPR1	P07272	904 aa	Predicted RBP	4.09	□□□□□ -1.75
BER1	YLR412W	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
BER1	YLR412W	MUP1	P50276	574 aa		4.09	□□□□□ -1.75
BER1	YLR412W	UBA2	P52488	636 aa		4.09	□□□□□ -1.75
BER1	YLR412W	ZIP2	P53061	704 aa		4.09	□□□□□ -1.75
BER1	YLR412W	ASM4	Q05166	528 aa		4.09	□□□□□ -1.75
BER1	YLR412W	FRE5	Q08908	694 aa		4.09	□□□□□ -1.75
BER1	YLR412W	MTC2	P34246	357 aa		4.08	□□□□□ -1.76
BER1	YLR412W	MTR3	P48240	250 aa	Predicted RBP	4.08	□□□□□ -1.76
BER1	YLR412W	NRG1	Q03125	231 aa		4.08	□□□□□ -1.76
BER1	YLR412W	CIT2	P08679	460 aa		4.07	□□□□□ -1.76
BER1	YLR412W	PHO8	P11491	566 aa		4.07	□□□□□ -1.76
BER1	YLR412W	STB4	P50104	949 aa		4.07	□□□□□ -1.76
BER1	YLR412W	MUK1	Q02866	612 aa		4.07	□□□□□ -1.76
BER1	YLR412W	YDR338C	Q05497	695 aa		4.07	□□□□□ -1.76
BER1	YLR412W	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
BER1	YLR412W	MCH5	Q08777	521 aa		4.07	□□□□□ -1.76
BER1	YLR412W	YLR125W	Q12138	136 aa		4.07	□□□□□ -1.76
BER1	YLR412W	GPR1	Q12361	961 aa		4.07	□□□□□ -1.76
BER1	YLR412W	MDM12	Q92328	271 aa		4.07	□□□□□ -1.76
BER1	YLR412W	CDC9	P04819	755 aa		4.06	□□□□□ -1.76
BER1	YLR412W	MCD4	P36051	919 aa		4.06	□□□□□ -1.76
BER1	YLR412W	PPS1	P38148	807 aa		4.06	□□□□□ -1.76
BER1	YLR412W	DSS1	P39112	969 aa		4.06	□□□□□ -1.76
BER1	YLR412W	ACF2	Q12168	779 aa		4.06	□□□□□ -1.76
BER1	YLR412W	MEF1	P25039	761 aa		4.05	□□□□□ -1.76
BER1	YLR412W	VBA3	P25594	458 aa		4.05	□□□□□ -1.76
BER1	YLR412W	THI4	P32318	326 aa		4.05	□□□□□ -1.76
BER1	YLR412W	STO1	P34160	861 aa	Known RBP	4.05	□□□□□ -1.76
BER1	YLR412W	YBR053C	P38235	358 aa		4.05	□□□□□ -1.76
BER1	YLR412W	AMA1	P50082	593 aa		4.05	□□□□□ -1.76
BER1	YLR412W	TIM44	Q01852	431 aa		4.05	□□□□□ -1.76
BER1	YLR412W	TMN2	Q04562	672 aa		4.05	□□□□□ -1.76
BER1	YLR412W	ADY4	Q05955	493 aa		4.05	□□□□□ -1.76
BER1	YLR412W	TGL5	Q12043	749 aa		4.05	□□□□□ -1.76
BER1	YLR412W	GSY1	P23337	708 aa		4.04	□□□□□ -1.76
BER1	YLR412W	MSH2	P25847	964 aa		4.04	□□□□□ -1.76
BER1	YLR412W	RPN10	P38886	268 aa	Known RBP	4.04	□□□□□ -1.76
BER1	YLR412W	YIR042C	P40586	236 aa		4.04	□□□□□ -1.76
BER1	YLR412W	YBR259W	P38338	688 aa		4.03	□□□□□ -1.76
BER1	YLR412W	SIC1	P38634	284 aa		4.03	□□□□□ -1.76
BER1	YLR412W	YFL052W	P43551	465 aa		4.03	□□□□□ -1.76
BER1	YLR412W	CAF16	P43569	289 aa		4.03	□□□□□ -1.76
BER1	YLR412W	OSW7	P43611	510 aa		4.03	□□□□□ -1.76
BER1	YLR412W	YJL163C	P46996	555 aa		4.03	□□□□□ -1.76
BER1	YLR412W	SNP1	Q00916	300 aa	Predicted RBP	4.03	□□□□□ -1.76
BER1	YLR412W	YLR149C	Q99296	730 aa		4.03	□□□□□ -1.76
BER1	YLR412W	Q0142	Q9ZZW4	58 aa		4.03	□□□□□ -1.76
BER1	YLR412W	YTA7	P40340	1379 aa		4.02	□□□□□ -1.77
BER1	YLR412W	PEX6	P33760	1030 aa		4.02	□□□□□ -1.77
BER1	YLR412W	STU2	P46675	888 aa		4.02	□□□□□ -1.77
BER1	YLR412W	BNA2	P47125	453 aa		4.02	□□□□□ -1.77
BER1	YLR412W	NPY1	P53164	384 aa		4.02	□□□□□ -1.77
BER1	YLR412W	YBP2	P53169	641 aa		4.02	□□□□□ -1.77
BER1	YLR412W	IRC13	Q08630	104 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms