RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C CHS2P14180 963 aa10.98□□□□□ -0.65
YSR3YKR053C GCS1P35197 352 aa10.98□□□□□ -0.65
YSR3YKR053C MNR2P35724 969 aa10.98□□□□□ -0.65
YSR3YKR053C SAF1P38352 637 aa10.98□□□□□ -0.65
YSR3YKR053C UBP5P39944 805 aa10.98□□□□□ -0.65
YSR3YKR053C RSM25P40496 264 aa10.98□□□□□ -0.65
YSR3YKR053C DAS1P47005 663 aa10.98□□□□□ -0.65
YSR3YKR053C YJL045WP47052 634 aa10.98□□□□□ -0.65
YSR3YKR053C STB4P50104 949 aa10.98□□□□□ -0.65
YSR3YKR053C LSC2P53312 427 aa10.98□□□□□ -0.65
YSR3YKR053C YNR014WP53719 212 aa10.98□□□□□ -0.65
YSR3YKR053C NOP13P53883 403 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
YSR3YKR053C STP1Q00947 519 aa10.98□□□□□ -0.65
YSR3YKR053C VMS1Q04311 632 aaKnown RBP10.98□□□□□ -0.65
YSR3YKR053C COG4Q06096 861 aa10.98□□□□□ -0.65
YSR3YKR053C PLP2Q12017 286 aa10.98□□□□□ -0.65
YSR3YKR053C REC8Q12188 680 aa10.98□□□□□ -0.65
YSR3YKR053C CIT2P08679 460 aa10.97□□□□□ -0.65
YSR3YKR053C PIN4P34217 668 aaKnown RBP RIP-Chip data10.97□□□□□ -0.65not detected
YSR3YKR053C YIR016WP40572 265 aa10.97□□□□□ -0.65
YSR3YKR053C FIG4P42837 879 aa10.97□□□□□ -0.65
YSR3YKR053C FYV8P46949 817 aaKnown RBP10.97□□□□□ -0.65
YSR3YKR053C SPC98P53540 846 aa10.97□□□□□ -0.65
YSR3YKR053C AFT2Q08957 416 aa10.97□□□□□ -0.65
YSR3YKR053C UBR2Q07963 1872 aa10.97□□□□□ -0.65
YSR3YKR053C VPS3P23643 1011 aa10.96□□□□□ -0.65
YSR3YKR053C RDH54P38086 958 aa10.96□□□□□ -0.65
YSR3YKR053C PTC4P38089 393 aa10.96□□□□□ -0.65
YSR3YKR053C SIP5P40210 489 aaKnown RBP10.96□□□□□ -0.65
YSR3YKR053C BFA1P47113 574 aa10.96□□□□□ -0.65
YSR3YKR053C YGR237CP50089 785 aa10.96□□□□□ -0.65
YSR3YKR053C NUT1P53114 1132 aa10.96□□□□□ -0.65
YSR3YKR053C SNU56Q03782 492 aaKnown RBP10.96□□□□□ -0.65
YSR3YKR053C YOL075CQ08234 1294 aa10.96□□□□□ -0.65
YSR3YKR053C GAL80P04387 435 aa10.95□□□□□ -0.66
YSR3YKR053C RAD27P26793 382 aa10.95□□□□□ -0.66
YSR3YKR053C COQ8P27697 501 aa10.95□□□□□ -0.66
YSR3YKR053C PSO2P30620 661 aa10.95□□□□□ -0.66
YSR3YKR053C YKL023WP36103 277 aaKnown RBP10.95□□□□□ -0.66
YSR3YKR053C AIP1P46680 615 aaKnown RBP10.95□□□□□ -0.66
YSR3YKR053C POL31P46957 487 aa10.95□□□□□ -0.66
YSR3YKR053C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.95□□□□□ -0.66not detected
YSR3YKR053C TIF35Q04067 274 aaKnown RBP10.95□□□□□ -0.66
YSR3YKR053C YLR257WQ06146 321 aaKnown RBP10.95□□□□□ -0.66
YSR3YKR053C FAL1Q12099 399 aaKnown RBP10.95□□□□□ -0.66
YSR3YKR053C GIS3Q12418 502 aa10.95□□□□□ -0.66
YSR3YKR053C KGD2P19262 463 aaPredicted RBP10.94□□□□□ -0.66
YSR3YKR053C SWI3P32591 825 aa10.94□□□□□ -0.66
YSR3YKR053C YBR284WP38150 797 aa10.94□□□□□ -0.66
YSR3YKR053C RRM3P38766 723 aa10.94□□□□□ -0.66
YSR3YKR053C RVS167P39743 482 aaKnown RBP10.94□□□□□ -0.66
YSR3YKR053C DJP1P40564 432 aa10.94□□□□□ -0.66
YSR3YKR053C MAF1P41910 395 aa10.94□□□□□ -0.66
YSR3YKR053C KRE33P53914 1056 aaKnown RBP10.94□□□□□ -0.66
YSR3YKR053C RPA49Q01080 415 aaPredicted RBP10.94□□□□□ -0.66
YSR3YKR053C ADA2Q02336 434 aa10.94□□□□□ -0.66
YSR3YKR053C GIR2Q03768 265 aaPredicted RBP10.94□□□□□ -0.66
YSR3YKR053C CDD1Q06549 142 aa10.94□□□□□ -0.66
YSR3YKR053C TRS33Q99394 268 aa10.94□□□□□ -0.66
YSR3YKR053C GSY2P27472 705 aa10.93□□□□□ -0.66
YSR3YKR053C NPR3P38742 1146 aa10.93□□□□□ -0.66
YSR3YKR053C CTM1P38818 585 aa10.93□□□□□ -0.66
YSR3YKR053C SMC3P47037 1230 aa10.93□□□□□ -0.66
YSR3YKR053C COS5P47187 383 aa10.93□□□□□ -0.66
YSR3YKR053C GFD1Q04839 188 aaKnown RBP10.93□□□□□ -0.66
YSR3YKR053C SNF1P06782 633 aaKnown RBP10.92□□□□□ -0.66
YSR3YKR053C PGS1P25578 521 aa10.92□□□□□ -0.66
YSR3YKR053C MSP1P28737 362 aa10.92□□□□□ -0.66
YSR3YKR053C PEX2P32800 271 aa10.92□□□□□ -0.66
YSR3YKR053C KDX1P36005 433 aa10.92□□□□□ -0.66
YSR3YKR053C ADE17P38009 592 aaKnown RBP10.92□□□□□ -0.66
YSR3YKR053C TBS1P38114 1094 aa10.92□□□□□ -0.66
YSR3YKR053C MOB1P40484 314 aa10.92□□□□□ -0.66
YSR3YKR053C MGA2P40578 1113 aa10.92□□□□□ -0.66
YSR3YKR053C TBF1Q02457 562 aa10.92□□□□□ -0.66
YSR3YKR053C HCR1Q05775 265 aaKnown RBP10.92□□□□□ -0.66
YSR3YKR053C RAD59Q12223 238 aa10.92□□□□□ -0.66
YSR3YKR053C APM4Q99186 491 aa10.92□□□□□ -0.66
YSR3YKR053C TPK1P06244 397 aa10.91□□□□□ -0.66
YSR3YKR053C MAS1P10507 462 aa10.91□□□□□ -0.66
YSR3YKR053C PEX1P24004 1043 aa10.91□□□□□ -0.66
YSR3YKR053C SLA2P33338 968 aa10.91□□□□□ -0.66
YSR3YKR053C LEO1P38439 464 aa10.91□□□□□ -0.66
YSR3YKR053C RIM4P38741 713 aa10.91□□□□□ -0.66
YSR3YKR053C PEX28P38848 579 aa10.91□□□□□ -0.66
YSR3YKR053C KAP123P40069 1113 aaKnown RBP10.91□□□□□ -0.66
YSR3YKR053C TAF1P46677 1066 aa10.91□□□□□ -0.66
YSR3YKR053C EBS1Q03466 884 aaKnown RBP10.91□□□□□ -0.66
YSR3YKR053C IWR1Q07532 353 aaPredicted RBP10.91□□□□□ -0.66
YSR3YKR053C YAP7Q08182 245 aa10.91□□□□□ -0.66
YSR3YKR053C YPR027CQ12079 277 aa10.91□□□□□ -0.66
YSR3YKR053C SLX4Q12098 748 aa10.91□□□□□ -0.66
YSR3YKR053C SPE1P08432 466 aa10.9□□□□□ -0.66
YSR3YKR053C APE1P14904 514 aa10.9□□□□□ -0.66
YSR3YKR053C MRC1P25588 1096 aa10.9□□□□□ -0.66
YSR3YKR053C RPN12P32496 274 aa10.9□□□□□ -0.66
YSR3YKR053C PEP7P32609 515 aa10.9□□□□□ -0.66
YSR3YKR053C EFM2P38347 419 aa10.9□□□□□ -0.66
YSR3YKR053C RGA2Q06407 1009 aa10.9□□□□□ -0.66
YSR3YKR053C HMG2P12684 1045 aa10.89□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms