RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W PTA1Q01329 785 aaPredicted RBP8.01□□□□□ -1.13
PEX28YHR150W ADA2Q02336 434 aa8.01□□□□□ -1.13
PEX28YHR150W TDA9Q04545 1251 aa8.01□□□□□ -1.13
PEX28YHR150W YDR278CQ05612 105 aa8.01□□□□□ -1.13
PEX28YHR150W PUS5Q06244 254 aa8.01□□□□□ -1.13
PEX28YHR150W SEY1Q99287 776 aa8.01□□□□□ -1.13
PEX28YHR150W PRP22P24384 1145 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W ILV6P25605 309 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W LOS1P33418 1100 aaPredicted RBP8□□□□□ -1.13
PEX28YHR150W HEL1P36113 551 aa8□□□□□ -1.13
PEX28YHR150W ECM2P38241 364 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W RRT2P38332 387 aa8□□□□□ -1.13
PEX28YHR150W HIS2P38635 335 aa8□□□□□ -1.13
PEX28YHR150W PSY2P40164 858 aa8□□□□□ -1.13
PEX28YHR150W LCB2P40970 561 aa8□□□□□ -1.13
PEX28YHR150W RRT6P53117 311 aaPredicted RBP8□□□□□ -1.13
PEX28YHR150W ESBP6P53918 673 aa8□□□□□ -1.13
PEX28YHR150W UTP6Q02354 440 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W YMR187CQ03236 431 aa8□□□□□ -1.13
PEX28YHR150W TAF9Q05027 157 aa8□□□□□ -1.13
PEX28YHR150W NOC3Q07896 663 aaPredicted RBP8□□□□□ -1.13
PEX28YHR150W NCR1Q12200 1170 aa8□□□□□ -1.13
PEX28YHR150W PHO8P11491 566 aa8□□□□□ -1.13
PEX28YHR150W TCP1P12612 559 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W POL3P15436 1097 aa8□□□□□ -1.13
PEX28YHR150W KAR3P17119 729 aa8□□□□□ -1.13
PEX28YHR150W YCR051WP25631 222 aa8□□□□□ -1.13
PEX28YHR150W SQT1P35184 431 aa8□□□□□ -1.13
PEX28YHR150W TRZ1P36159 838 aaPredicted RBP8□□□□□ -1.13
PEX28YHR150W PBP2P38151 413 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
PEX28YHR150W REG2P38232 338 aa8□□□□□ -1.13
PEX28YHR150W EXO5P38289 585 aa8□□□□□ -1.13
PEX28YHR150W TIF5P38431 405 aaKnown RBP8□□□□□ -1.13
PEX28YHR150W FIG4P42837 879 aa8□□□□□ -1.13
PEX28YHR150W VPS53P47061 822 aa8□□□□□ -1.13
PEX28YHR150W YAF9P53930 226 aa8□□□□□ -1.13
PEX28YHR150W ARK1P53974 638 aa8□□□□□ -1.13
PEX28YHR150W SLD5Q03406 294 aa8□□□□□ -1.13
PEX28YHR150W FRA1Q07825 749 aa8□□□□□ -1.13
PEX28YHR150W ACM1Q08981 209 aa8□□□□□ -1.13
PEX28YHR150W CDC19P00549 500 aaKnown RBP7.99□□□□□ -1.13
PEX28YHR150W HOP09932 586 aa7.99□□□□□ -1.13
PEX28YHR150W PDB1P32473 366 aaKnown RBP7.99□□□□□ -1.13
PEX28YHR150W RAD54P32863 898 aa7.99□□□□□ -1.13
PEX28YHR150W SWH1P35845 1188 aa7.99□□□□□ -1.13
PEX28YHR150W YBR062CP38239 180 aa7.99□□□□□ -1.13
PEX28YHR150W SAK1P38990 1142 aa7.99□□□□□ -1.13
PEX28YHR150W YMR1P47147 688 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
PEX28YHR150W TIM8P57744 87 aa7.99□□□□□ -1.13
PEX28YHR150W ISA1Q07821 250 aaPredicted RBP7.99□□□□□ -1.13
PEX28YHR150W ADH4P10127 382 aa7.98□□□□□ -1.13
PEX28YHR150W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
PEX28YHR150W GPI10P30777 616 aa7.98□□□□□ -1.13
PEX28YHR150W RRN6P32786 894 aa7.98□□□□□ -1.13
PEX28YHR150W ERC1P38767 581 aa7.98□□□□□ -1.13
PEX28YHR150W DMA1P38823 416 aa7.98□□□□□ -1.13
PEX28YHR150W GPB2P39717 880 aa7.98□□□□□ -1.13
PEX28YHR150W INA22P40576 216 aa7.98□□□□□ -1.13
PEX28YHR150W ENV11P53246 860 aa7.98□□□□□ -1.13
PEX28YHR150W HOT1Q03213 719 aa7.98□□□□□ -1.13
PEX28YHR150W SMC5Q08204 1093 aa7.98□□□□□ -1.13
PEX28YHR150W CFT2Q12102 859 aaPredicted RBP7.98□□□□□ -1.13
PEX28YHR150W SNF1P06782 633 aaKnown RBP7.98□□□□□ -1.13
PEX28YHR150W RPB2P08518 1224 aaKnown RBP7.98□□□□□ -1.13
PEX28YHR150W TKL1P23254 680 aaKnown RBP7.98□□□□□ -1.13
PEX28YHR150W PLC1P32383 869 aa7.98□□□□□ -1.13
PEX28YHR150W YSC83P32792 385 aa7.98□□□□□ -1.13
PEX28YHR150W VPS35P34110 944 aa7.98□□□□□ -1.13
PEX28YHR150W RIX1P38883 763 aaPredicted RBP7.98□□□□□ -1.13
PEX28YHR150W NET1P47035 1189 aa7.98□□□□□ -1.13
PEX28YHR150W ATG1P53104 897 aa7.98□□□□□ -1.13
PEX28YHR150W MPC54Q08550 464 aa7.98□□□□□ -1.13
PEX28YHR150W TAF10Q12030 206 aa7.98□□□□□ -1.13
PEX28YHR150W SLX4Q12098 748 aa7.98□□□□□ -1.13
PEX28YHR150W NCA2Q12374 616 aa7.98□□□□□ -1.13
PEX28YHR150W ERP3Q12403 225 aa7.98□□□□□ -1.13
PEX28YHR150W CDC33P07260 213 aaKnown RBP7.97□□□□□ -1.13
PEX28YHR150W ARD1P07347 238 aaPredicted RBP7.97□□□□□ -1.13
PEX28YHR150W SRV2P17555 526 aaKnown RBP7.97□□□□□ -1.13
PEX28YHR150W KIP1P28742 1111 aa7.97□□□□□ -1.13
PEX28YHR150W YME1P32795 747 aa7.97□□□□□ -1.13
PEX28YHR150W NCL1P38205 684 aaKnown RBP7.97□□□□□ -1.13
PEX28YHR150W SPC72P39723 622 aa7.97□□□□□ -1.13
PEX28YHR150W YGR125WP53273 1036 aa7.97□□□□□ -1.13
PEX28YHR150W CEF1Q03654 590 aaPredicted RBP7.97□□□□□ -1.13
PEX28YHR150W CUR1Q06469 252 aa7.97□□□□□ -1.13
PEX28YHR150W RLP24Q07915 199 aaKnown RBP7.97□□□□□ -1.13
PEX28YHR150W HIF1Q12373 385 aa7.97□□□□□ -1.13
PEX28YHR150W GAL11P19659 1081 aa7.96□□□□□ -1.14
PEX28YHR150W CDC11P32458 415 aa7.96□□□□□ -1.14
PEX28YHR150W EUG1P32474 517 aa7.96□□□□□ -1.14
PEX28YHR150W TFC4P33339 1025 aa7.96□□□□□ -1.14
PEX28YHR150W END3P39013 349 aa7.96□□□□□ -1.14
PEX28YHR150W HMF1P40037 129 aaKnown RBP7.96□□□□□ -1.14
PEX28YHR150W AVT1P47082 602 aa7.96□□□□□ -1.14
PEX28YHR150W MTG1Q03151 367 aaPredicted RBP7.96□□□□□ -1.14
PEX28YHR150W JIP4Q03361 876 aa7.96□□□□□ -1.14
PEX28YHR150W FAR8Q05040 523 aa7.96□□□□□ -1.14
PEX28YHR150W GPI13Q07830 1017 aa7.96□□□□□ -1.14
PEX28YHR150W NOB1Q08444 459 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms