RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W YMR187CQ03236 431 aa9.64□□□□□ -0.87
VPS62YGR141W CWC15Q03772 175 aaKnown RBP9.64□□□□□ -0.87
VPS62YGR141W ATG16Q03818 150 aa9.64□□□□□ -0.87
VPS62YGR141W SFH1Q06168 426 aa9.64□□□□□ -0.87
VPS62YGR141W YOR223WQ12015 292 aa9.64□□□□□ -0.87
VPS62YGR141W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
VPS62YGR141W CDC48P25694 835 aaKnown RBP9.63□□□□□ -0.87
VPS62YGR141W TFC4P33339 1025 aa9.63□□□□□ -0.87
VPS62YGR141W TRZ1P36159 838 aaPredicted RBP9.63□□□□□ -0.87
VPS62YGR141W GDT1P38301 280 aaPredicted RBP9.63□□□□□ -0.87
VPS62YGR141W YTA12P40341 825 aa9.63□□□□□ -0.87
VPS62YGR141W TRS85P46944 698 aa9.63□□□□□ -0.87
VPS62YGR141W NET1P47035 1189 aa9.63□□□□□ -0.87
VPS62YGR141W VPS70P47161 811 aa9.63□□□□□ -0.87
VPS62YGR141W YGR125WP53273 1036 aa9.63□□□□□ -0.87
VPS62YGR141W NOC3Q07896 663 aaPredicted RBP9.63□□□□□ -0.87
VPS62YGR141W RPB2P08518 1224 aaKnown RBP9.62□□□□□ -0.87
VPS62YGR141W TKL1P23254 680 aaKnown RBP9.62□□□□□ -0.87
VPS62YGR141W SPT5P27692 1063 aaKnown RBP9.62□□□□□ -0.87
VPS62YGR141W UTR4P32626 227 aa9.62□□□□□ -0.87
VPS62YGR141W YME1P32795 747 aa9.62□□□□□ -0.87
VPS62YGR141W PIN4P34217 668 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
VPS62YGR141W SPC42P36094 363 aa9.62□□□□□ -0.87
VPS62YGR141W EXO5P38289 585 aa9.62□□□□□ -0.87
VPS62YGR141W RRT2P38332 387 aa9.62□□□□□ -0.87
VPS62YGR141W RPS3P05750 240 aaKnown RBP9.61□□□□□ -0.87
VPS62YGR141W NAT1P12945 854 aaKnown RBP9.61□□□□□ -0.87
VPS62YGR141W DBF4P32325 704 aa9.61□□□□□ -0.87
VPS62YGR141W EUG1P32474 517 aa9.61□□□□□ -0.87
VPS62YGR141W SHP1P34223 423 aa9.61□□□□□ -0.87
VPS62YGR141W SQT1P35184 431 aa9.61□□□□□ -0.87
VPS62YGR141W RPC37P36121 282 aa9.61□□□□□ -0.87
VPS62YGR141W MMS21P38632 267 aa9.61□□□□□ -0.87
VPS62YGR141W YGR111WP53265 400 aa9.61□□□□□ -0.87
VPS62YGR141W RTT102P53330 157 aa9.61□□□□□ -0.87
VPS62YGR141W SEY1Q99287 776 aa9.61□□□□□ -0.87
VPS62YGR141W ADH4P10127 382 aa9.6□□□□□ -0.87
VPS62YGR141W YDJ1P25491 409 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W SWI3P32591 825 aa9.6□□□□□ -0.87
VPS62YGR141W PAM1P37304 830 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W REG2P38232 338 aa9.6□□□□□ -0.87
VPS62YGR141W TIF5P38431 405 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W YEL025CP39991 1188 aa9.6□□□□□ -0.87
VPS62YGR141W FTR1P40088 404 aa9.6□□□□□ -0.87
VPS62YGR141W HSH155P49955 971 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W YGL039WP53183 348 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W UTP6Q02354 440 aaKnown RBP9.6□□□□□ -0.87
VPS62YGR141W SLX4Q12098 748 aa9.6□□□□□ -0.87
VPS62YGR141W PKC1P24583 1151 aa9.59□□□□□ -0.87
VPS62YGR141W CDC10P25342 322 aaKnown RBP9.59□□□□□ -0.87
VPS62YGR141W CSG2P35206 410 aa9.59□□□□□ -0.87
VPS62YGR141W VPS29P38759 282 aa9.59□□□□□ -0.87
VPS62YGR141W PMC1P38929 1173 aaPredicted RBP9.59□□□□□ -0.87
VPS62YGR141W INA22P40576 216 aa9.59□□□□□ -0.87
VPS62YGR141W SAP185P40856 1058 aa9.59□□□□□ -0.87
VPS62YGR141W YNL320WP42840 284 aa9.59□□□□□ -0.87
VPS62YGR141W CLA4P48562 842 aa9.59□□□□□ -0.87
VPS62YGR141W BRO1P48582 844 aa9.59□□□□□ -0.87
VPS62YGR141W RIM8P53179 542 aa9.59□□□□□ -0.87
VPS62YGR141W YGR130CP53278 816 aa9.59□□□□□ -0.87
VPS62YGR141W DOS2P54858 310 aa9.59□□□□□ -0.87
VPS62YGR141W YMR102CQ03177 834 aa9.59□□□□□ -0.87
VPS62YGR141W TDA9Q04545 1251 aa9.59□□□□□ -0.87
VPS62YGR141W COQ9Q05779 260 aa9.59□□□□□ -0.87
VPS62YGR141W IES4Q08561 116 aa9.59□□□□□ -0.87
VPS62YGR141W MAM3Q12296 706 aa9.59□□□□□ -0.87
VPS62YGR141W ERP3Q12403 225 aa9.59□□□□□ -0.87
VPS62YGR141W YOL087CQ99247 1116 aa9.59□□□□□ -0.87
VPS62YGR141W SPT2P06843 333 aaPredicted RBP9.58□□□□□ -0.88
VPS62YGR141W PMS1P14242 873 aa9.58□□□□□ -0.88
VPS62YGR141W PRP9P19736 530 aaKnown RBP9.58□□□□□ -0.88
VPS62YGR141W YBL055CP34220 418 aaPredicted RBP9.58□□□□□ -0.88
VPS62YGR141W ERC1P38767 581 aa9.58□□□□□ -0.88
VPS62YGR141W KAP123P40069 1113 aaKnown RBP9.58□□□□□ -0.88
VPS62YGR141W AVT1P47082 602 aa9.58□□□□□ -0.88
VPS62YGR141W YMR1P47147 688 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
VPS62YGR141W STE20Q03497 939 aaKnown RBP9.58□□□□□ -0.88
VPS62YGR141W RGA2Q06407 1009 aa9.58□□□□□ -0.88
VPS62YGR141W IWR1Q07532 353 aaPredicted RBP9.58□□□□□ -0.88
VPS62YGR141W GIS3Q12418 502 aa9.58□□□□□ -0.88
VPS62YGR141W SPO16P17122 198 aa9.57□□□□□ -0.88
VPS62YGR141W ILV6P25605 309 aaKnown RBP9.57□□□□□ -0.88
VPS62YGR141W NCL1P38205 684 aaKnown RBP9.57□□□□□ -0.88
VPS62YGR141W ECM2P38241 364 aaKnown RBP9.57□□□□□ -0.88
VPS62YGR141W END3P39013 349 aa9.57□□□□□ -0.88
VPS62YGR141W CCT2P39076 527 aaKnown RBP9.57□□□□□ -0.88
VPS62YGR141W CPR7P47103 393 aa9.57□□□□□ -0.88
VPS62YGR141W PEX29Q03370 554 aa9.57□□□□□ -0.88
VPS62YGR141W FRA1Q07825 749 aa9.57□□□□□ -0.88
VPS62YGR141W CFT2Q12102 859 aaPredicted RBP9.57□□□□□ -0.88
VPS62YGR141W DED1P06634 604 aaKnown RBP9.56□□□□□ -0.88
VPS62YGR141W ADE3P07245 946 aaKnown RBP9.56□□□□□ -0.88
VPS62YGR141W PDR1P12383 1068 aa9.56□□□□□ -0.88
VPS62YGR141W PEP5P12868 1029 aa9.56□□□□□ -0.88
VPS62YGR141W DAL2P25335 343 aa9.56□□□□□ -0.88
VPS62YGR141W RME1P32338 300 aaKnown RBP9.56□□□□□ -0.88
VPS62YGR141W PLC1P32383 869 aa9.56□□□□□ -0.88
VPS62YGR141W DPH2P32461 534 aa9.56□□□□□ -0.88
VPS62YGR141W RRN6P32786 894 aa9.56□□□□□ -0.88
VPS62YGR141W OAF3P36023 863 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 113.6 ms