RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	GTF1	P53260	183 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN3	YER021W	YBT1	P32386	1661 aa		4.16	□□□□□ -1.74
RPN3	YER021W	NUP188	P52593	1655 aa	Known RBP	4.16	□□□□□ -1.74
RPN3	YER021W	HAP1	P0CE41	1502 aa		4.16	□□□□□ -1.74
RPN3	YER021W	RIM8	P53179	542 aa		4.15	□□□□□ -1.74
RPN3	YER021W	PBP1	P53297	722 aa	Known RBP	4.15	□□□□□ -1.74
RPN3	YER021W	ADY3	Q07732	790 aa		4.15	□□□□□ -1.74
RPN3	YER021W	HSF1	P10961	833 aa		4.14	□□□□□ -1.75
RPN3	YER021W	SCT1	P32784	759 aa		4.14	□□□□□ -1.75
RPN3	YER021W	TPO1	Q07824	586 aa		4.14	□□□□□ -1.75
RPN3	YER021W	GPB1	Q08886	897 aa		4.14	□□□□□ -1.75
RPN3	YER021W	HMI1	Q12039	706 aa		4.14	□□□□□ -1.75
RPN3	YER021W	IML1	P47170	1584 aa		4.14	□□□□□ -1.75
RPN3	YER021W	NOT3	P06102	836 aa	Known RBP	4.14	□□□□□ -1.75
RPN3	YER021W	SPE1	P08432	466 aa		4.14	□□□□□ -1.75
RPN3	YER021W	TOD6	P34219	525 aa		4.14	□□□□□ -1.75
RPN3	YER021W	POA1	P38218	177 aa		4.14	□□□□□ -1.75
RPN3	YER021W	SPT20	P50875	604 aa		4.14	□□□□□ -1.75
RPN3	YER021W	MAL11	P53048	616 aa		4.14	□□□□□ -1.75
RPN3	YER021W	RAI1	P53063	387 aa	Known RBP	4.14	□□□□□ -1.75
RPN3	YER021W	VPS62	P53285	467 aa		4.14	□□□□□ -1.75
RPN3	YER021W	ENV7	Q12003	364 aa		4.14	□□□□□ -1.75
RPN3	YER021W	EMC1	P25574	760 aa		4.13	□□□□□ -1.75
RPN3	YER021W	CDC20	P26309	610 aa		4.13	□□□□□ -1.75
RPN3	YER021W	STE13	P33894	931 aa		4.13	□□□□□ -1.75
RPN3	YER021W	GYP8	P43570	497 aa		4.13	□□□□□ -1.75
RPN3	YER021W	MET12	P46151	657 aa		4.13	□□□□□ -1.75
RPN3	YER021W	YAP6	Q03935	383 aa		4.13	□□□□□ -1.75
RPN3	YER021W	RXT3	Q07458	294 aa		4.13	□□□□□ -1.75
RPN3	YER021W	PHO8	P11491	566 aa		4.12	□□□□□ -1.75
RPN3	YER021W	GDH3	P39708	457 aa		4.12	□□□□□ -1.75
RPN3	YER021W	OSW7	P43611	510 aa		4.12	□□□□□ -1.75
RPN3	YER021W	ALG2	P43636	503 aa		4.12	□□□□□ -1.75
RPN3	YER021W	ACK1	Q07622	623 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN3	YER021W	YLR125W	Q12138	136 aa		4.12	□□□□□ -1.75
RPN3	YER021W	MPH2	P0CD99	609 aa		4.11	□□□□□ -1.75
RPN3	YER021W	RFA1	P22336	621 aa	Known RBP	4.11	□□□□□ -1.75
RPN3	YER021W	HSV2	P50079	448 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN3	YER021W	PSP2	P50109	593 aa	Known RBP	4.11	□□□□□ -1.75
RPN3	YER021W	RNH70	P53331	553 aa		4.11	□□□□□ -1.75
RPN3	YER021W	YGR283C	P53336	341 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN3	YER021W	SSL1	Q04673	461 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN3	YER021W	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
RPN3	YER021W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RPN3	YER021W	HIS5	P07172	385 aa		4.1	□□□□□ -1.75
RPN3	YER021W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RPN3	YER021W	URA1	P28272	314 aa	Predicted RBP	4.1	□□□□□ -1.75
RPN3	YER021W	RPD3	P32561	433 aa		4.1	□□□□□ -1.75
RPN3	YER021W	EMC3	P36039	253 aa		4.1	□□□□□ -1.75
RPN3	YER021W	HDA1	P53973	706 aa		4.1	□□□□□ -1.75
RPN3	YER021W	URN1	Q06525	465 aa	Known RBP	4.1	□□□□□ -1.75
RPN3	YER021W	NOP12	Q08208	459 aa	Known RBP	4.1	□□□□□ -1.75
RPN3	YER021W	SPC29	P33419	253 aa		4.1	□□□□□ -1.75
RPN3	YER021W	ATG19	P35193	415 aa		4.1	□□□□□ -1.75
RPN3	YER021W	URM1	P40554	99 aa	Predicted RBP	4.1	□□□□□ -1.75
RPN3	YER021W	CEP3	P40969	608 aa		4.1	□□□□□ -1.75
RPN3	YER021W	CHA4	P43634	648 aa		4.1	□□□□□ -1.75
RPN3	YER021W	NIT3	P49954	291 aa		4.1	□□□□□ -1.75
RPN3	YER021W	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
RPN3	YER021W	VMR1	P38735	1592 aa		4.09	□□□□□ -1.75
RPN3	YER021W	FBP1	P09201	348 aa		4.09	□□□□□ -1.75
RPN3	YER021W	THI4	P32318	326 aa		4.09	□□□□□ -1.75
RPN3	YER021W	TYE7	P33122	291 aa	Predicted RBP	4.09	□□□□□ -1.75
RPN3	YER021W	TY4A-J	P47023	414 aa		4.09	□□□□□ -1.75
RPN3	YER021W	ALG12	P53730	551 aa		4.09	□□□□□ -1.75
RPN3	YER021W	YKR011C	Q02209	353 aa		4.09	□□□□□ -1.75
RPN3	YER021W	RPP2A	P05319	106 aa	Known RBP	4.08	□□□□□ -1.76
RPN3	YER021W	DAL7	P21826	554 aa		4.08	□□□□□ -1.76
RPN3	YER021W	RAD53	P22216	821 aa		4.08	□□□□□ -1.76
RPN3	YER021W	PPG1	P32838	368 aa		4.08	□□□□□ -1.76
RPN3	YER021W	LST4	P34239	828 aa		4.08	□□□□□ -1.76
RPN3	YER021W	RRP14	P36080	434 aa	Known RBP	4.08	□□□□□ -1.76
RPN3	YER021W	PLB1	P39105	664 aa		4.08	□□□□□ -1.76
RPN3	YER021W	DAM1	P53267	343 aa		4.08	□□□□□ -1.76
RPN3	YER021W	VPS30	Q02948	557 aa		4.08	□□□□□ -1.76
RPN3	YER021W	ATP25	Q03153	612 aa		4.08	□□□□□ -1.76
RPN3	YER021W	YLR358C	O13565	187 aa		4.07	□□□□□ -1.76
RPN3	YER021W	MET6	P05694	767 aa	Known RBP	4.07	□□□□□ -1.76
RPN3	YER021W	MSH2	P25847	964 aa		4.07	□□□□□ -1.76
RPN3	YER021W	YIL108W	P40483	696 aa	Known RBP	4.07	□□□□□ -1.76
RPN3	YER021W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RPN3	YER021W	TAD1	P53065	400 aa		4.07	□□□□□ -1.76
RPN3	YER021W	NCS6	P53088	359 aa		4.07	□□□□□ -1.76
RPN3	YER021W	LRS4	Q04087	347 aa	Known RBP	4.07	□□□□□ -1.76
RPN3	YER021W	TMA10	Q06177	86 aa		4.07	□□□□□ -1.76
RPN3	YER021W	MET7	Q08645	548 aa		4.07	□□□□□ -1.76
RPN3	YER021W	UPC2	Q12151	913 aa		4.07	□□□□□ -1.76
RPN3	YER021W	MDM12	Q92328	271 aa		4.07	□□□□□ -1.76
RPN3	YER021W	CAT8	P39113	1433 aa		4.07	□□□□□ -1.76
RPN3	YER021W	RPS9A	O13516	197 aa	Known RBP	4.06	□□□□□ -1.76
RPN3	YER021W	MEF1	P25039	761 aa		4.06	□□□□□ -1.76
RPN3	YER021W	YCL002C	P25565	263 aa		4.06	□□□□□ -1.76
RPN3	YER021W	STE14	P32584	239 aa		4.06	□□□□□ -1.76
RPN3	YER021W	NMD2	P38798	1089 aa	Known RBP	4.06	□□□□□ -1.76
RPN3	YER021W	NOG2	P53742	486 aa	Known RBP	4.06	□□□□□ -1.76
RPN3	YER021W	CLU1	Q03690	1277 aa	Known RBP	4.06	□□□□□ -1.76
RPN3	YER021W	NPC2	Q12408	173 aa		4.06	□□□□□ -1.76
RPN3	YER021W	KCS1	Q12494	1050 aa		4.06	□□□□□ -1.76
RPN3	YER021W	CYS3	P31373	394 aa	Known RBP	4.06	□□□□□ -1.76
RPN3	YER021W	YDR514C	Q04408	483 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms