RNA–Protein interactions for RNA: YDR496C

PUF6, Transcript of Pumilio-homology domain protein, yeastyeast

Gene PUF6, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF6YDR496C ABD1P32783 436 aaPredicted RBP3.25□□□□□ -1.89
PUF6YDR496C NUP120P35729 1037 aa3.25□□□□□ -1.89
PUF6YDR496C BFR1P38934 470 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
PUF6YDR496C CCT3P39077 534 aaKnown RBP3.25□□□□□ -1.89
PUF6YDR496C OCA1P50946 238 aaPredicted RBP3.25□□□□□ -1.89
PUF6YDR496C YNR063WP53749 607 aa3.25□□□□□ -1.89
PUF6YDR496C YNL247WP53852 767 aaKnown RBP3.25□□□□□ -1.89
PUF6YDR496C BUL2Q03758 920 aaKnown RBP3.25□□□□□ -1.89
PUF6YDR496C TIF35Q04067 274 aaKnown RBP3.25□□□□□ -1.89
PUF6YDR496C YDR286CQ05530 114 aa3.25□□□□□ -1.89
PUF6YDR496C YLH47Q06493 454 aa3.25□□□□□ -1.89
PUF6YDR496C PPM2Q08282 695 aa3.25□□□□□ -1.89
PUF6YDR496C SMC4Q12267 1418 aa3.25□□□□□ -1.89
PUF6YDR496C NUP159P40477 1460 aa3.24□□□□□ -1.89
PUF6YDR496C RED1P14291 827 aa3.24□□□□□ -1.89
PUF6YDR496C MER1P16523 270 aa3.24□□□□□ -1.89
PUF6YDR496C HNM1P19807 563 aa3.24□□□□□ -1.89
PUF6YDR496C ADP1P25371 1049 aa3.24□□□□□ -1.89
PUF6YDR496C SYP1P25623 870 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C SFP1P32432 683 aa3.24□□□□□ -1.89
PUF6YDR496C VMA8P32610 256 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C MOT2P34909 587 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C TRZ1P36159 838 aaPredicted RBP3.24□□□□□ -1.89
PUF6YDR496C NOP4P37838 685 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C RRF1P38771 230 aa3.24□□□□□ -1.89
PUF6YDR496C MEF2P39677 819 aa3.24□□□□□ -1.89
PUF6YDR496C IRC24P40580 263 aa3.24□□□□□ -1.89
PUF6YDR496C SHE10P53075 577 aa3.24□□□□□ -1.89
PUF6YDR496C VID30P53076 958 aa3.24□□□□□ -1.89
PUF6YDR496C SPC105P53148 917 aa3.24□□□□□ -1.89
PUF6YDR496C RKM2Q03942 479 aa3.24□□□□□ -1.89
PUF6YDR496C RAD33Q04231 177 aa3.24□□□□□ -1.89
PUF6YDR496C YLR225CQ05948 407 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C TDA5Q06417 326 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C AOS1Q06624 347 aa3.24□□□□□ -1.89
PUF6YDR496C SWA2Q06677 668 aa3.24□□□□□ -1.89
PUF6YDR496C PUS7Q08647 676 aaKnown RBP3.24□□□□□ -1.89
PUF6YDR496C TRE1Q08919 783 aa3.24□□□□□ -1.89
PUF6YDR496C LAP2Q10740 671 aa3.24□□□□□ -1.89
PUF6YDR496C YOL087CQ99247 1116 aa3.24□□□□□ -1.89
PUF6YDR496C TUF1P02992 437 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C ELM1P32801 640 aa3.23□□□□□ -1.89
PUF6YDR496C POL12P38121 705 aaPredicted RBP3.23□□□□□ -1.89
PUF6YDR496C TIF5P38431 405 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C OTU2P38747 307 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C ETP1P38748 585 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C VPS41P38959 992 aa3.23□□□□□ -1.89
PUF6YDR496C PEX7P39108 375 aa3.23□□□□□ -1.89
PUF6YDR496C ESL1P40456 1118 aa3.23□□□□□ -1.89
PUF6YDR496C IRR1P40541 1150 aa3.23□□□□□ -1.89
PUF6YDR496C MNT3P40549 630 aa3.23□□□□□ -1.89
PUF6YDR496C GPP1P41277 250 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C RSC8P43609 557 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C SET2P46995 733 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C YJR120WP47157 116 aa3.23□□□□□ -1.89
PUF6YDR496C ZDS2P54786 942 aa3.23□□□□□ -1.89
PUF6YDR496C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PUF6YDR496C TPP1Q03796 238 aa3.23□□□□□ -1.89
PUF6YDR496C RSA3Q05942 220 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C GGA1Q06336 557 aa3.23□□□□□ -1.89
PUF6YDR496C SPN1Q06505 410 aaPredicted RBP3.23□□□□□ -1.89
PUF6YDR496C ARV1Q06541 321 aa3.23□□□□□ -1.89
PUF6YDR496C PSR2Q07949 397 aa3.23□□□□□ -1.89
PUF6YDR496C ETT1Q08421 412 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C PGC1Q08959 321 aa3.23□□□□□ -1.89
PUF6YDR496C YPL066WQ12194 479 aa3.23□□□□□ -1.89
PUF6YDR496C YOR1P53049 1477 aa3.23□□□□□ -1.89
PUF6YDR496C IRC20Q06554 1556 aa3.23□□□□□ -1.89
PUF6YDR496C SPP41P38904 1435 aa3.23□□□□□ -1.89
PUF6YDR496C STF1P01098 86 aa3.23□□□□□ -1.89
PUF6YDR496C SST2P11972 698 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C INO1P11986 533 aa3.23□□□□□ -1.89
PUF6YDR496C RPB4P20433 221 aaPredicted RBP3.23□□□□□ -1.89
PUF6YDR496C DBP5P20449 482 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C RET1P22276 1149 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C SMY1P32364 656 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C HSP78P33416 811 aa3.23□□□□□ -1.89
PUF6YDR496C LRG1P35688 1017 aa3.23□□□□□ -1.89
PUF6YDR496C ALG3P38179 458 aa3.23□□□□□ -1.89
PUF6YDR496C EXO84P38261 753 aa3.23□□□□□ -1.89
PUF6YDR496C YMR124WP39523 943 aaKnown RBP3.23□□□□□ -1.89
PUF6YDR496C TMA108P40462 946 aa3.23□□□□□ -1.89
PUF6YDR496C BUD27P43573 796 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PUF6YDR496C ECL1P48235 211 aa3.23□□□□□ -1.89
PUF6YDR496C GYP7P48365 746 aa3.23□□□□□ -1.89
PUF6YDR496C YGR237CP50089 785 aa3.23□□□□□ -1.89
PUF6YDR496C UBA2P52488 636 aa3.23□□□□□ -1.89
PUF6YDR496C ORC3P54790 616 aa3.23□□□□□ -1.89
PUF6YDR496C SPP382Q06411 708 aaPredicted RBP3.23□□□□□ -1.89
PUF6YDR496C MED1Q12321 566 aa3.23□□□□□ -1.89
PUF6YDR496C DFG16Q99234 619 aa3.23□□□□□ -1.89
PUF6YDR496C YRF1-1P0CX20 1796 aa3.22□□□□□ -1.89
PUF6YDR496C YRF1-5P0CX21 1796 aa3.22□□□□□ -1.89
PUF6YDR496C YRF1-8P0CX22 1796 aa3.22□□□□□ -1.89
PUF6YDR496C RPL8AP17076 256 aaKnown RBP3.22□□□□□ -1.89
PUF6YDR496C PET123P17558 318 aa3.22□□□□□ -1.89
PUF6YDR496C GLK1P17709 500 aaKnown RBP3.22□□□□□ -1.89
PUF6YDR496C PUF4P25339 888 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89 RIP-Chip
PUF6YDR496C AGP1P25376 633 aa3.22□□□□□ -1.89
PUF6YDR496C CHS3P29465 1165 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms