RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C BAP2P38084 609 aa5.69□□□□□ -1.5
RPB7YDR404C GYP8P43570 497 aa5.69□□□□□ -1.5
RPB7YDR404C ENV11P53246 860 aa5.69□□□□□ -1.5
RPB7YDR404C SDA1P53313 767 aaKnown RBP5.69□□□□□ -1.5
RPB7YDR404C MRPL22P53881 309 aa5.69□□□□□ -1.5
RPB7YDR404C RCL1Q08096 367 aaPredicted RBP5.69□□□□□ -1.5
RPB7YDR404C ENT1Q12518 454 aa5.69□□□□□ -1.5
RPB7YDR404C PDR5P33302 1511 aaKnown RBP5.69□□□□□ -1.5
RPB7YDR404C THS1P04801 734 aaKnown RBP5.68□□□□□ -1.5
RPB7YDR404C SRD1P09007 221 aa5.68□□□□□ -1.5
RPB7YDR404C TSL1P38427 1098 aaKnown RBP5.68□□□□□ -1.5
RPB7YDR404C TY4A-JP47023 414 aa5.68□□□□□ -1.5
RPB7YDR404C CCM1P48237 864 aaPredicted RBP5.68□□□□□ -1.5
RPB7YDR404C GPG1P53130 126 aa5.68□□□□□ -1.5
RPB7YDR404C YGR283CP53336 341 aaPredicted RBP5.68□□□□□ -1.5
RPB7YDR404C SNO2P53823 222 aa5.68□□□□□ -1.5
RPB7YDR404C CDA2Q06703 312 aa5.68□□□□□ -1.5
RPB7YDR404C TMA17Q12513 150 aa5.68□□□□□ -1.5
RPB7YDR404C YRF1-2P40105 1681 aa5.67□□□□□ -1.5
RPB7YDR404C BI4P03879 638 aa5.67□□□□□ -1.5
RPB7YDR404C TOP1P04786 769 aa5.67□□□□□ -1.5
RPB7YDR404C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
RPB7YDR404C MTC2P34246 357 aa5.67□□□□□ -1.5
RPB7YDR404C GRX7P38068 203 aa5.67□□□□□ -1.5
RPB7YDR404C PIK1P39104 1066 aa5.67□□□□□ -1.5
RPB7YDR404C NPP2P39997 493 aa5.67□□□□□ -1.5
RPB7YDR404C MGS1P40151 587 aa5.67□□□□□ -1.5
RPB7YDR404C GYP7P48365 746 aa5.67□□□□□ -1.5
RPB7YDR404C MTC3P53077 123 aa5.67□□□□□ -1.5
RPB7YDR404C MDM38Q08179 573 aa5.67□□□□□ -1.5
RPB7YDR404C YOL057WQ08225 711 aa5.67□□□□□ -1.5
RPB7YDR404C YLL058WQ12198 575 aa5.67□□□□□ -1.5
RPB7YDR404C YDL177CQ12257 170 aa5.67□□□□□ -1.5
RPB7YDR404C RAD18P10862 487 aa5.66□□□□□ -1.5
RPB7YDR404C PCL2P25693 308 aa5.66□□□□□ -1.5
RPB7YDR404C TSA1P34760 196 aaKnown RBP5.66□□□□□ -1.5
RPB7YDR404C EMC3P36039 253 aa5.66□□□□□ -1.5
RPB7YDR404C MET13P53128 600 aa5.66□□□□□ -1.5
RPB7YDR404C ATP25Q03153 612 aa5.66□□□□□ -1.5
RPB7YDR404C ENV7Q12003 364 aa5.66□□□□□ -1.5
RPB7YDR404C FAP7Q12055 197 aaPredicted RBP5.66□□□□□ -1.5
RPB7YDR404C YKR078WP36158 585 aaKnown RBP5.65□□□□□ -1.5
RPB7YDR404C AIM3P38266 947 aaKnown RBP5.65□□□□□ -1.5
RPB7YDR404C YBR238CP38330 731 aaKnown RBP5.65□□□□□ -1.5
RPB7YDR404C GIC1P38785 314 aa5.65□□□□□ -1.5
RPB7YDR404C NUG1P40010 520 aaKnown RBP5.65□□□□□ -1.5
RPB7YDR404C YJR120WP47157 116 aa5.65□□□□□ -1.5
RPB7YDR404C DAM1P53267 343 aa5.65□□□□□ -1.5
RPB7YDR404C RSC3Q06639 885 aa5.65□□□□□ -1.5
RPB7YDR404C MET7Q08645 548 aa5.65□□□□□ -1.5
RPB7YDR404C KRE5P22023 1365 aa5.65□□□□□ -1.51
RPB7YDR404C SFL1P20134 766 aa5.64□□□□□ -1.51
RPB7YDR404C YEL1P34225 687 aa5.64□□□□□ -1.51
RPB7YDR404C ENP1P38333 483 aaKnown RBP5.64□□□□□ -1.51
RPB7YDR404C YER158CP40095 573 aa5.64□□□□□ -1.51
RPB7YDR404C CAF16P43569 289 aa5.64□□□□□ -1.51
RPB7YDR404C YKE2P52553 114 aa5.64□□□□□ -1.51
RPB7YDR404C SRT1Q03175 343 aa5.64□□□□□ -1.51
RPB7YDR404C IMH1Q06704 911 aaKnown RBP5.64□□□□□ -1.51
RPB7YDR404C PRP6P19735 899 aaPredicted RBP5.63□□□□□ -1.51
RPB7YDR404C CDC48P25694 835 aaKnown RBP5.63□□□□□ -1.51
RPB7YDR404C STO1P34160 861 aaKnown RBP5.63□□□□□ -1.51
RPB7YDR404C TPM2P40414 161 aa5.63□□□□□ -1.51
RPB7YDR404C NOP2P40991 618 aaKnown RBP5.63□□□□□ -1.51
RPB7YDR404C GPP1P41277 250 aaKnown RBP5.63□□□□□ -1.51
RPB7YDR404C SFB2P53953 876 aa5.63□□□□□ -1.51
RPB7YDR404C FUN30P31380 1131 aa5.62□□□□□ -1.51
RPB7YDR404C MCD4P36051 919 aa5.62□□□□□ -1.51
RPB7YDR404C RRT14P40470 206 aa5.62□□□□□ -1.51
RPB7YDR404C NIT3P49954 291 aa5.62□□□□□ -1.51
RPB7YDR404C RIM8P53179 542 aa5.62□□□□□ -1.51
RPB7YDR404C PEX8P53248 589 aa5.62□□□□□ -1.51
RPB7YDR404C MTQ2Q03920 221 aaPredicted RBP5.62□□□□□ -1.51
RPB7YDR404C YDR514CQ04408 483 aa5.62□□□□□ -1.51
RPB7YDR404C HFD1Q04458 532 aa5.62□□□□□ -1.51
RPB7YDR404C ACE2P21192 770 aa5.61□□□□□ -1.51
RPB7YDR404C PER1P25625 357 aa5.61□□□□□ -1.51
RPB7YDR404C YKL222CP35995 705 aa5.61□□□□□ -1.51
RPB7YDR404C RFC5P38251 354 aa5.61□□□□□ -1.51
RPB7YDR404C YJR096WP47137 282 aa5.61□□□□□ -1.51
RPB7YDR404C RSM24Q03976 319 aa5.61□□□□□ -1.51
RPB7YDR404C CFT1Q06632 1357 aaKnown RBP5.6□□□□□ -1.51
RPB7YDR404C RPS13P05756 151 aaKnown RBP5.6□□□□□ -1.51
RPB7YDR404C MPH2P0CD99 609 aa5.6□□□□□ -1.51
RPB7YDR404C EUG1P32474 517 aa5.6□□□□□ -1.51
RPB7YDR404C PCM1P38628 557 aaKnown RBP5.6□□□□□ -1.51
RPB7YDR404C HFM1P51979 1187 aa5.6□□□□□ -1.51
RPB7YDR404C RIA1P53893 1110 aa5.6□□□□□ -1.51
RPB7YDR404C SNP1Q00916 300 aaPredicted RBP5.6□□□□□ -1.51
RPB7YDR404C COG8Q04632 607 aa5.6□□□□□ -1.51
RPB7YDR404C SGD1Q06132 899 aa5.6□□□□□ -1.51
RPB7YDR404C SVS1Q12254 260 aa5.6□□□□□ -1.51
RPB7YDR404C RRP5Q05022 1729 aaKnown RBP5.6□□□□□ -1.51
RPB7YDR404C CYC1P00044 109 aaPredicted RBP5.59□□□□□ -1.51
RPB7YDR404C SOD2P00447 233 aa5.59□□□□□ -1.51
RPB7YDR404C HOG1P32485 435 aa5.59□□□□□ -1.51
RPB7YDR404C YBR071WP38243 211 aa5.59□□□□□ -1.51
RPB7YDR404C AIM14P53109 570 aa5.59□□□□□ -1.51
RPB7YDR404C COG6P53959 839 aa5.59□□□□□ -1.51
RPB7YDR404C ATG33Q06485 197 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms