RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	CIC1	P38779	376 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	VHR1	P40522	640 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	NEO1	P40527	1151 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	ARP5	P53946	755 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	PRO2	P54885	456 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	ADA2	Q02336	434 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	VHS3	Q08438	674 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	RTT10	Q08924	1013 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	LAT1	P12695	482 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	MNE1	P24720	663 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	ERG3	P32353	365 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	DPH5	P32469	300 aa	Predicted RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	YBR238C	P38330	731 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	SSM4	P40318	1319 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	YIR014W	P40570	242 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	MMM1	P41800	426 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	VPS53	P47061	822 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	PUS6	P53294	404 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	JJJ1	P53863	590 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	MSH6	Q03834	1242 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	RVB2	Q12464	471 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	SKS1	Q12505	502 aa		4.8	□□□□□ -1.64
SBE2	YDR351W	PAR32	Q12515	295 aa	Known RBP	4.8	□□□□□ -1.64
SBE2	YDR351W	PUT4	P15380	627 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	HEM12	P32347	362 aa	Predicted RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	MRP4	P32902	394 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	AIM9	P40053	627 aa	Known RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	ATG3	P40344	310 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	ENP2	P48234	707 aa	Known RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	YNL144C	P53907	740 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	BDS1	Q08347	646 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	BUG1	Q12191	341 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	NCR1	Q12200	1170 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	ADE8	P04161	214 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	DAL7	P21826	554 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	DBP1	P24784	617 aa	Known RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	RRP7	P25368	297 aa	Predicted RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	ITR1	P30605	584 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	POL12	P38121	705 aa	Predicted RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	PCH2	P38126	564 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	GND1	P38720	489 aa	Known RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	RRM3	P38766	723 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	RTS1	P38903	757 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	LTP1	P40347	161 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	EMW1	P42842	904 aa	Known RBP	4.79	□□□□□ -1.64
SBE2	YDR351W	CIR1	P42940	261 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	BLS1	Q06071	122 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	ATG26	Q06321	1198 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	YVC1	Q12324	675 aa		4.79	□□□□□ -1.64
SBE2	YDR351W	PTR2	P32901	601 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	SLX1	P38324	304 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	STL1	P39932	569 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	FTR1	P40088	404 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SBE2	YDR351W	LOC1	P43586	204 aa	Predicted RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	NOP9	P47077	666 aa	Known RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	YGL140C	P53120	1219 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YNR068C	P53754	272 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YPL071C	Q02864	156 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YMR155W	Q03795	547 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YPR109W	Q06104	294 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	SFI1	Q12369	946 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	GCR1	P07261	785 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	KSS1	P14681	368 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	PFK1	P16861	987 aa	Known RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	DMC1	P25453	334 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	AFR1	P33304	620 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	SEG2	P34250	1132 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YKL023W	P36103	277 aa	Known RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	VBA5	P36172	582 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	MCM7	P38132	845 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	CCZ1	P38273	704 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	AMN1	P38285	549 aa	Predicted RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	RAD55	P38953	406 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	OAF1	P39720	1047 aa	Predicted RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	DPH1	P40487	425 aa	Known RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	LSC1	P53598	329 aa	Known RBP	4.78	□□□□□ -1.64
SBE2	YDR351W	CIK1	Q01649	594 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	YPL107W	Q02873	248 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	FRE6	Q12473	712 aa		4.78	□□□□□ -1.64
SBE2	YDR351W	CPA2	P03965	1118 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	CKA1	P15790	372 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SLY41	P22215	453 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SPS22	P25380	463 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SMI1	P32566	505 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SRB4	P32569	687 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	YSW1	P38280	609 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	YBR197C	P38306	217 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	STU2	P46675	888 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	MNN11	P46985	422 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	YJR096W	P47137	282 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	LYS4	P49367	693 aa	Predicted RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	SAP4	P53036	818 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	MET13	P53128	600 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	UTP22	P53254	1237 aa	Predicted RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	TOF2	Q02208	771 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	YPL109C	Q02981	657 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	YML119W	Q03208	357 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	INP2	Q03824	705 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms