RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YNL193WP53870 558 aa2.24□□□□□ -2.05
MSH5YDL154W GCD1P09032 578 aaPredicted RBP2.23□□□□□ -2.05
MSH5YDL154W DAL7P21826 554 aa2.23□□□□□ -2.05
MSH5YDL154W MEF1P25039 761 aa2.23□□□□□ -2.05
MSH5YDL154W SPC29P33419 253 aa2.23□□□□□ -2.05
MSH5YDL154W ZRG8P40021 1076 aa2.23□□□□□ -2.05
MSH5YDL154W ATG13Q06628 738 aa2.23□□□□□ -2.05
MSH5YDL154W FAP7Q12055 197 aaPredicted RBP2.23□□□□□ -2.05
MSH5YDL154W DIF1O13577 133 aa2.23□□□□□ -2.05
MSH5YDL154W PRC1P00729 532 aa2.23□□□□□ -2.05
MSH5YDL154W CDC9P04819 755 aa2.23□□□□□ -2.05
MSH5YDL154W HSF1P10961 833 aa2.23□□□□□ -2.05
MSH5YDL154W SKN7P38889 622 aa2.23□□□□□ -2.05
MSH5YDL154W GYP8P43570 497 aa2.23□□□□□ -2.05
MSH5YDL154W BFA1P47113 574 aa2.23□□□□□ -2.05
MSH5YDL154W YGR283CP53336 341 aaPredicted RBP2.23□□□□□ -2.05
MSH5YDL154W ALO1P54783 526 aaKnown RBP2.23□□□□□ -2.05
MSH5YDL154W CRR1Q05790 422 aa2.23□□□□□ -2.05
MSH5YDL154W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
MSH5YDL154W ENV7Q12003 364 aa2.23□□□□□ -2.05
MSH5YDL154W PGM1P33401 570 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W YAP1801P38856 637 aa2.22□□□□□ -2.05
MSH5YDL154W YFL052WP43551 465 aa2.22□□□□□ -2.05
MSH5YDL154W YGR237CP50089 785 aa2.22□□□□□ -2.05
MSH5YDL154W ZDS1P50111 915 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W RAI1P53063 387 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W NRD1P53617 575 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
MSH5YDL154W RSC3Q06639 885 aa2.22□□□□□ -2.05
MSH5YDL154W MDM12Q92328 271 aa2.22□□□□□ -2.05
MSH5YDL154W TY2B-BQ12491 1770 aa2.22□□□□□ -2.05
MSH5YDL154W RPP2AP05319 106 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W URA1P28272 314 aaPredicted RBP2.22□□□□□ -2.05
MSH5YDL154W TOM20P35180 183 aa2.22□□□□□ -2.05
MSH5YDL154W SET5P38890 526 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W UBP12P39538 1254 aa2.22□□□□□ -2.05
MSH5YDL154W YIL108WP40483 696 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W YNR029CP53729 429 aaKnown RBP2.22□□□□□ -2.05
MSH5YDL154W ATP25Q03153 612 aa2.22□□□□□ -2.05
MSH5YDL154W GUD1Q07729 489 aa2.22□□□□□ -2.05
MSH5YDL154W XYL2Q07993 356 aa2.22□□□□□ -2.05
MSH5YDL154W SRD1P09007 221 aa2.21□□□□□ -2.06
MSH5YDL154W HSP78P33416 811 aa2.21□□□□□ -2.06
MSH5YDL154W GRX7P38068 203 aa2.21□□□□□ -2.06
MSH5YDL154W ECM21P38167 1117 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W POA1P38218 177 aa2.21□□□□□ -2.06
MSH5YDL154W TAD1P53065 400 aa2.21□□□□□ -2.06
MSH5YDL154W UME1Q03010 460 aa2.21□□□□□ -2.06
MSH5YDL154W THI73Q07904 523 aa2.21□□□□□ -2.06
MSH5YDL154W TRP3P00937 484 aa2.21□□□□□ -2.06
MSH5YDL154W CYS3P31373 394 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W TYE7P33122 291 aaPredicted RBP2.21□□□□□ -2.06
MSH5YDL154W AFR1P33304 620 aa2.21□□□□□ -2.06
MSH5YDL154W OMA1P36163 345 aa2.21□□□□□ -2.06
MSH5YDL154W NPP2P39997 493 aa2.21□□□□□ -2.06
MSH5YDL154W CCT8P47079 568 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W MAL11P53048 616 aa2.21□□□□□ -2.06
MSH5YDL154W YGR012WP53206 393 aa2.21□□□□□ -2.06
MSH5YDL154W GTF1P53260 183 aaPredicted RBP2.21□□□□□ -2.06
MSH5YDL154W PBP1P53297 722 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W SNP1Q00916 300 aaPredicted RBP2.21□□□□□ -2.06
MSH5YDL154W HFD1Q04458 532 aa2.21□□□□□ -2.06
MSH5YDL154W YOR022CQ12204 715 aa2.21□□□□□ -2.06
MSH5YDL154W MLP2P40457 1679 aa2.21□□□□□ -2.06
MSH5YDL154W TY1B-JR2P47100 1755 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W TY1B-ER2Q03619 1755 aa2.21□□□□□ -2.06
MSH5YDL154W TY1B-MR1Q04214 1755 aa2.21□□□□□ -2.06
MSH5YDL154W TY1B-MR2Q04670 1755 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W TY1B-LR1Q12088 1755 aaKnown RBP2.21□□□□□ -2.06
MSH5YDL154W TY1B-NL1Q12112 1755 aa2.21□□□□□ -2.06
MSH5YDL154W TY1B-GR1Q12141 1755 aa2.21□□□□□ -2.06
MSH5YDL154W TY1B-BLQ12490 1755 aa2.21□□□□□ -2.06
MSH5YDL154W CYC1P00044 109 aaPredicted RBP2.2□□□□□ -2.06
MSH5YDL154W GAL10P04397 699 aa2.2□□□□□ -2.06
MSH5YDL154W SFL1P20134 766 aa2.2□□□□□ -2.06
MSH5YDL154W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
MSH5YDL154W PRP19P32523 503 aaKnown RBP2.2□□□□□ -2.06
MSH5YDL154W GRX4P32642 244 aa2.2□□□□□ -2.06
MSH5YDL154W YKR073CP36153 106 aa2.2□□□□□ -2.06
MSH5YDL154W TYS1P36421 394 aaKnown RBP2.2□□□□□ -2.06
MSH5YDL154W POL12P38121 705 aaPredicted RBP2.2□□□□□ -2.06
MSH5YDL154W RLP7P40693 322 aaKnown RBP2.2□□□□□ -2.06
MSH5YDL154W MTC3P53077 123 aa2.2□□□□□ -2.06
MSH5YDL154W NPY1P53164 384 aa2.2□□□□□ -2.06
MSH5YDL154W ROT1Q03691 256 aa2.2□□□□□ -2.06
MSH5YDL154W YPL277CQ08989 487 aa2.2□□□□□ -2.06
MSH5YDL154W STE13P33894 931 aa2.2□□□□□ -2.06
MSH5YDL154W YKR011CQ02209 353 aa2.2□□□□□ -2.06
MSH5YDL154W BUL2Q03758 920 aaKnown RBP2.2□□□□□ -2.06
MSH5YDL154W COG8Q04632 607 aa2.2□□□□□ -2.06
MSH5YDL154W YEL1P34225 687 aa2.19□□□□□ -2.06
MSH5YDL154W MTC2P34246 357 aa2.19□□□□□ -2.06
MSH5YDL154W CAF16P43569 289 aa2.19□□□□□ -2.06
MSH5YDL154W SNO2P53823 222 aa2.19□□□□□ -2.06
MSH5YDL154W LRS4Q04087 347 aaKnown RBP2.19□□□□□ -2.06
MSH5YDL154W NHX1Q04121 633 aa2.19□□□□□ -2.06
MSH5YDL154W GUP2Q08929 609 aa2.19□□□□□ -2.06
MSH5YDL154W GIN4Q12263 1142 aa2.19□□□□□ -2.06
MSH5YDL154W LPX1Q12405 387 aaKnown RBP2.19□□□□□ -2.06
MSH5YDL154W IQG1Q12280 1495 aa2.19□□□□□ -2.06
MSH5YDL154W YCL002CP25565 263 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms