RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeast

Gene RRP42, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP42	YDL111C	GYP8	P43570	497 aa		4.24	□□□□□ -1.73
RRP42	YDL111C	GYP7	P48365	746 aa		4.24	□□□□□ -1.73
RRP42	YDL111C	NIT3	P49954	291 aa		4.24	□□□□□ -1.73
RRP42	YDL111C	EXG2	P52911	562 aa		4.24	□□□□□ -1.73
RRP42	YDL111C	MDM38	Q08179	573 aa		4.24	□□□□□ -1.73
RRP42	YDL111C	ATP4	P05626	244 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	ENA1	P13587	1091 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	SFL1	P20134	766 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	SWE1	P32944	819 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	YBR071W	P38243	211 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	TSL1	P38427	1098 aa	Known RBP	4.23	□□□□□ -1.73
RRP42	YDL111C	MSS4	P38994	779 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	GPP1	P41277	250 aa	Known RBP	4.23	□□□□□ -1.73
RRP42	YDL111C	YKE2	P52553	114 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	MET13	P53128	600 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	KIN4	Q01919	800 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	MTQ2	Q03920	221 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP42	YDL111C	RSC3	Q06639	885 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	CDA1	Q06702	301 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	REH1	Q06709	432 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	TRE2	Q08693	809 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	ENV7	Q12003	364 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	ENA5	Q12691	1091 aa		4.23	□□□□□ -1.73
RRP42	YDL111C	RPP2A	P05319	106 aa	Known RBP	4.22	□□□□□ -1.73
RRP42	YDL111C	RAD18	P10862	487 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	PWP2	P25635	923 aa	Known RBP	4.22	□□□□□ -1.73
RRP42	YDL111C	CDC48	P25694	835 aa	Known RBP	4.22	□□□□□ -1.73
RRP42	YDL111C	RPC82	P32349	654 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	EUG1	P32474	517 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	YER158C	P40095	573 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	YJR120W	P47157	116 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	COG6	P53959	839 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	YML122C	Q03207	126 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	CEF1	Q03654	590 aa	Predicted RBP	4.22	□□□□□ -1.73
RRP42	YDL111C	YDR514C	Q04408	483 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	MET7	Q08645	548 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	SLX4	Q12098	748 aa		4.22	□□□□□ -1.73
RRP42	YDL111C	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	FUN30	P31380	1131 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	HOG1	P32485	435 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	MCD4	P36051	919 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	ERT1	P38140	529 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	ECM21	P38167	1117 aa	Known RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	PCM1	P38628	557 aa	Known RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	PMC1	P38929	1173 aa	Predicted RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	CKB2	P38930	258 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	DUG1	P43616	481 aa	Known RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	TY4A-J	P47023	414 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	YGR012W	P53206	393 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	SNP1	Q00916	300 aa	Predicted RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	SRT1	Q03175	343 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	VPS72	Q03388	795 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	VMS1	Q04311	632 aa	Known RBP	4.21	□□□□□ -1.74
RRP42	YDL111C	GUD1	Q07729	489 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	KCS1	Q12494	1050 aa		4.21	□□□□□ -1.74
RRP42	YDL111C	VPS24	P36095	224 aa	Known RBP	4.2	□□□□□ -1.74
RRP42	YDL111C	GIC1	P38785	314 aa		4.2	□□□□□ -1.74
RRP42	YDL111C	GZF3	P42944	551 aa	Known RBP	4.2	□□□□□ -1.74
RRP42	YDL111C	YJR096W	P47137	282 aa		4.2	□□□□□ -1.74
RRP42	YDL111C	PEX14	P53112	341 aa		4.2	□□□□□ -1.74
RRP42	YDL111C	YTM1	Q12024	460 aa	Predicted RBP	4.2	□□□□□ -1.74
RRP42	YDL111C	SPE1	P08432	466 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	HSF1	P10961	833 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	PFK1	P16861	987 aa	Known RBP	4.19	□□□□□ -1.74
RRP42	YDL111C	DPB3	P27344	201 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	PRP19	P32523	503 aa	Known RBP	4.19	□□□□□ -1.74
RRP42	YDL111C	TRZ1	P36159	838 aa	Predicted RBP	4.19	□□□□□ -1.74
RRP42	YDL111C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
RRP42	YDL111C	PEA2	P40091	420 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	URM1	P40554	99 aa	Predicted RBP	4.19	□□□□□ -1.74
RRP42	YDL111C	SND1	Q04007	877 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	ATG33	Q06485	197 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	GIN4	Q12263	1142 aa		4.19	□□□□□ -1.74
RRP42	YDL111C	KAR1	P11927	433 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	AEP2	P22136	580 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	HRR25	P29295	494 aa	Known RBP	4.18	□□□□□ -1.74
RRP42	YDL111C	SRP101	P32916	621 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	RPN10	P38886	268 aa	Known RBP	4.18	□□□□□ -1.74
RRP42	YDL111C	OAF1	P39720	1047 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP42	YDL111C	NPP2	P39997	493 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	DAS1	P47005	663 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RRP42	YDL111C	NCS6	P53088	359 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	NOG2	P53742	486 aa	Known RBP	4.18	□□□□□ -1.74
RRP42	YDL111C	NHX1	Q04121	633 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	ENB1	Q08299	606 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	GUP2	Q08929	609 aa		4.18	□□□□□ -1.74
RRP42	YDL111C	PLC1	P32383	869 aa		4.17	□□□□□ -1.74
RRP42	YDL111C	MNN11	P46985	422 aa	Known RBP	4.17	□□□□□ -1.74
RRP42	YDL111C	PSP2	P50109	593 aa	Known RBP	4.17	□□□□□ -1.74
RRP42	YDL111C	TGL2	P54857	326 aa		4.17	□□□□□ -1.74
RRP42	YDL111C	AIM39	Q08223	395 aa		4.17	□□□□□ -1.74
RRP42	YDL111C	NYV1	Q12255	253 aa		4.17	□□□□□ -1.74
RRP42	YDL111C	LAS17	Q12446	633 aa		4.17	□□□□□ -1.74
RRP42	YDL111C	SST2	P11972	698 aa	Known RBP	4.16	□□□□□ -1.74
RRP42	YDL111C	HMG1	P12683	1054 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	RFA1	P22336	621 aa	Known RBP	4.16	□□□□□ -1.74
RRP42	YDL111C	PER1	P25625	357 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms