RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W DFG16Q99234 619 aa5.88□□□□□ -1.47
PTC1YDL006W SEC7P11075 2009 aaKnown RBP5.87□□□□□ -1.47
PTC1YDL006W NOT3P06102 836 aaKnown RBP5.87□□□□□ -1.47
PTC1YDL006W URA1P28272 314 aaPredicted RBP5.87□□□□□ -1.47
PTC1YDL006W SFP1P32432 683 aa5.87□□□□□ -1.47
PTC1YDL006W SRP101P32916 621 aa5.87□□□□□ -1.47
PTC1YDL006W STE13P33894 931 aa5.87□□□□□ -1.47
PTC1YDL006W ATG19P35193 415 aa5.87□□□□□ -1.47
PTC1YDL006W ETP1P38748 585 aaKnown RBP5.87□□□□□ -1.47
PTC1YDL006W ZRG8P40021 1076 aa5.87□□□□□ -1.47
PTC1YDL006W MND2P40577 368 aa5.87□□□□□ -1.47
PTC1YDL006W ECL1P48235 211 aa5.87□□□□□ -1.47
PTC1YDL006W PSP2P50109 593 aaKnown RBP5.87□□□□□ -1.47
PTC1YDL006W TFB2Q02939 513 aa5.87□□□□□ -1.47
PTC1YDL006W MET7Q08645 548 aa5.87□□□□□ -1.47
PTC1YDL006W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PTC1YDL006W YDL177CQ12257 170 aa5.87□□□□□ -1.47
PTC1YDL006W GAL10P04397 699 aa5.86□□□□□ -1.47
PTC1YDL006W RPL8AP17076 256 aaKnown RBP5.86□□□□□ -1.47
PTC1YDL006W SRM1P21827 482 aa5.86□□□□□ -1.47
PTC1YDL006W MTC2P34246 357 aa5.86□□□□□ -1.47
PTC1YDL006W POL12P38121 705 aaPredicted RBP5.86□□□□□ -1.47
PTC1YDL006W PBP1P53297 722 aaKnown RBP5.86□□□□□ -1.47
PTC1YDL006W COG8Q04632 607 aa5.86□□□□□ -1.47
PTC1YDL006W SGD1Q06132 899 aa5.86□□□□□ -1.47
PTC1YDL006W YOR352WQ08816 343 aa5.86□□□□□ -1.47
PTC1YDL006W VBA3P25594 458 aa5.85□□□□□ -1.47
PTC1YDL006W STO1P34160 861 aaKnown RBP5.85□□□□□ -1.47
PTC1YDL006W MAC1P35192 417 aa5.85□□□□□ -1.47
PTC1YDL006W URN1Q06525 465 aaKnown RBP5.85□□□□□ -1.47
PTC1YDL006W RSC3Q06639 885 aa5.85□□□□□ -1.47
PTC1YDL006W CDC9P04819 755 aa5.84□□□□□ -1.47
PTC1YDL006W SPE1P08432 466 aa5.84□□□□□ -1.47
PTC1YDL006W SRD1P09007 221 aa5.84□□□□□ -1.47
PTC1YDL006W ENA1P13587 1091 aa5.84□□□□□ -1.47
PTC1YDL006W CAF16P43569 289 aa5.84□□□□□ -1.47
PTC1YDL006W TY4A-JP47023 414 aa5.84□□□□□ -1.47
PTC1YDL006W DNM1P54861 757 aa5.84□□□□□ -1.47
PTC1YDL006W ENA2Q01896 1091 aa5.84□□□□□ -1.47
PTC1YDL006W YLR001CQ07895 862 aa5.84□□□□□ -1.47
PTC1YDL006W ENA5Q12691 1091 aa5.84□□□□□ -1.47
PTC1YDL006W CHC1P22137 1653 aaKnown RBP5.84□□□□□ -1.47
PTC1YDL006W RPS9AO13516 197 aaKnown RBP5.83□□□□□ -1.48
PTC1YDL006W TYE7P33122 291 aaPredicted RBP5.83□□□□□ -1.48
PTC1YDL006W LAM1P38851 1228 aa5.83□□□□□ -1.48
PTC1YDL006W YNL193WP53870 558 aa5.83□□□□□ -1.48
PTC1YDL006W MRPL22P53881 309 aa5.83□□□□□ -1.48
PTC1YDL006W HDA1P53973 706 aa5.83□□□□□ -1.48
PTC1YDL006W YKR011CQ02209 353 aa5.83□□□□□ -1.48
PTC1YDL006W ADY3Q07732 790 aa5.83□□□□□ -1.48
PTC1YDL006W DNF2Q12675 1612 aa5.82□□□□□ -1.48
PTC1YDL006W ADR1P07248 1323 aa5.82□□□□□ -1.48
PTC1YDL006W DAL7P21826 554 aa5.82□□□□□ -1.48
PTC1YDL006W MCD4P36051 919 aa5.82□□□□□ -1.48
PTC1YDL006W POA1P38218 177 aa5.82□□□□□ -1.48
PTC1YDL006W PAF1P38351 445 aa5.82□□□□□ -1.48
PTC1YDL006W TAD1P53065 400 aa5.82□□□□□ -1.48
PTC1YDL006W SNP1Q00916 300 aaPredicted RBP5.82□□□□□ -1.48
PTC1YDL006W FBP1P09201 348 aa5.81□□□□□ -1.48
PTC1YDL006W LRG1P35688 1017 aa5.81□□□□□ -1.48
PTC1YDL006W CRP1P38845 465 aaKnown RBP5.81□□□□□ -1.48
PTC1YDL006W MET12P46151 657 aa5.81□□□□□ -1.48
PTC1YDL006W HXT16P47185 567 aa5.81□□□□□ -1.48
PTC1YDL006W ZDS1P50111 915 aaKnown RBP5.81□□□□□ -1.48
PTC1YDL006W YDR132CQ03900 495 aa5.81□□□□□ -1.48
PTC1YDL006W TPO1Q07824 586 aa5.81□□□□□ -1.48
PTC1YDL006W CYS3P31373 394 aaKnown RBP5.8□□□□□ -1.48
PTC1YDL006W YAP3P38749 330 aa5.8□□□□□ -1.48
PTC1YDL006W URM1P40554 99 aaPredicted RBP5.8□□□□□ -1.48
PTC1YDL006W RLP7P40693 322 aaKnown RBP5.8□□□□□ -1.48
PTC1YDL006W CEP3P40969 608 aa5.8□□□□□ -1.48
PTC1YDL006W PLB2Q03674 706 aa5.8□□□□□ -1.48
PTC1YDL006W PCL2P25693 308 aa5.79□□□□□ -1.48
PTC1YDL006W HOG1P32485 435 aa5.79□□□□□ -1.48
PTC1YDL006W TSA1P34760 196 aaKnown RBP5.79□□□□□ -1.48
PTC1YDL006W SET5P38890 526 aaKnown RBP5.79□□□□□ -1.48
PTC1YDL006W MEF2P39677 819 aa5.79□□□□□ -1.48
PTC1YDL006W MGS1P40151 587 aa5.79□□□□□ -1.48
PTC1YDL006W PMT3P47190 753 aa5.79□□□□□ -1.48
PTC1YDL006W HLJ1P48353 224 aa5.79□□□□□ -1.48
PTC1YDL006W PUS2P53167 370 aa5.79□□□□□ -1.48
PTC1YDL006W VPS62P53285 467 aa5.79□□□□□ -1.48
PTC1YDL006W YNR029CP53729 429 aaKnown RBP5.79□□□□□ -1.48
PTC1YDL006W GCN5Q03330 439 aa5.79□□□□□ -1.48
PTC1YDL006W DUS4Q06063 367 aa5.79□□□□□ -1.48
PTC1YDL006W GPB1Q08886 897 aa5.79□□□□□ -1.48
PTC1YDL006W HMI1Q12039 706 aa5.79□□□□□ -1.48
PTC1YDL006W YBR182C-AQ8TGU6 64 aa5.79□□□□□ -1.48
PTC1YDL006W GCN2P15442 1659 aa5.79□□□□□ -1.48
PTC1YDL006W CDC6P09119 513 aa5.78□□□□□ -1.48
PTC1YDL006W RAD18P10862 487 aa5.78□□□□□ -1.48
PTC1YDL006W PER1P25625 357 aa5.78□□□□□ -1.48
PTC1YDL006W GRX4P32642 244 aa5.78□□□□□ -1.48
PTC1YDL006W UBP12P39538 1254 aa5.78□□□□□ -1.48
PTC1YDL006W YIL108WP40483 696 aaKnown RBP5.78□□□□□ -1.48
PTC1YDL006W ALY2P47029 1046 aa5.78□□□□□ -1.48
PTC1YDL006W PRP43P53131 767 aaKnown RBP5.78□□□□□ -1.48
PTC1YDL006W SDA1P53313 767 aaKnown RBP5.78□□□□□ -1.48
PTC1YDL006W ROT1Q03691 256 aa5.78□□□□□ -1.48
PTC1YDL006W LRS4Q04087 347 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms