RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C MPH2P0CD99 609 aa4.19□□□□□ -1.74
SHG1YBR258C CMP2P14747 604 aa4.19□□□□□ -1.74
SHG1YBR258C RPN11P43588 306 aaKnown RBP4.19□□□□□ -1.74
SHG1YBR258C TY4A-JP47023 414 aa4.19□□□□□ -1.74
SHG1YBR258C YGR012WP53206 393 aa4.19□□□□□ -1.74
SHG1YBR258C DAM1P53267 343 aa4.19□□□□□ -1.74
SHG1YBR258C DUS4Q06063 367 aa4.19□□□□□ -1.74
SHG1YBR258C CDA2Q06703 312 aa4.19□□□□□ -1.74
SHG1YBR258C NTG2Q08214 380 aa4.19□□□□□ -1.74
SHG1YBR258C YRF1-2P40105 1681 aa4.19□□□□□ -1.74
SHG1YBR258C SPE1P08432 466 aa4.18□□□□□ -1.74
SHG1YBR258C FBP1P09201 348 aa4.18□□□□□ -1.74
SHG1YBR258C MEF1P25039 761 aa4.18□□□□□ -1.74
SHG1YBR258C URA1P28272 314 aaPredicted RBP4.18□□□□□ -1.74
SHG1YBR258C ELM1P32801 640 aa4.18□□□□□ -1.74
SHG1YBR258C SRP101P32916 621 aa4.18□□□□□ -1.74
SHG1YBR258C STE13P33894 931 aa4.18□□□□□ -1.74
SHG1YBR258C BRN1P38170 754 aa4.18□□□□□ -1.74
SHG1YBR258C LAM1P38851 1228 aa4.18□□□□□ -1.74
SHG1YBR258C ZRG8P40021 1076 aa4.18□□□□□ -1.74
SHG1YBR258C NIT1P40447 199 aa4.18□□□□□ -1.74
SHG1YBR258C RAI1P53063 387 aaKnown RBP4.18□□□□□ -1.74
SHG1YBR258C VPS62P53285 467 aa4.18□□□□□ -1.74
SHG1YBR258C DUS1P53759 423 aaKnown RBP4.18□□□□□ -1.74
SHG1YBR258C MRPL22P53881 309 aa4.18□□□□□ -1.74
SHG1YBR258C PLB2Q03674 706 aa4.18□□□□□ -1.74
SHG1YBR258C UTP14Q04500 899 aaKnown RBP4.18□□□□□ -1.74
SHG1YBR258C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
SHG1YBR258C GCN2P15442 1659 aa4.18□□□□□ -1.74
SHG1YBR258C RPP2AP05319 106 aaKnown RBP4.17□□□□□ -1.74
SHG1YBR258C NOT3P06102 836 aaKnown RBP4.17□□□□□ -1.74
SHG1YBR258C MTC2P34246 357 aa4.17□□□□□ -1.74
SHG1YBR258C SEG2P34250 1132 aa4.17□□□□□ -1.74
SHG1YBR258C ATG19P35193 415 aa4.17□□□□□ -1.74
SHG1YBR258C MNN1P39106 762 aa4.17□□□□□ -1.74
SHG1YBR258C MEF2P39677 819 aa4.17□□□□□ -1.74
SHG1YBR258C URM1P40554 99 aaPredicted RBP4.17□□□□□ -1.74
SHG1YBR258C NIT3P49954 291 aa4.17□□□□□ -1.74
SHG1YBR258C HDA1P53973 706 aa4.17□□□□□ -1.74
SHG1YBR258C YPR196WQ06595 470 aa4.17□□□□□ -1.74
SHG1YBR258C REH1Q06709 432 aa4.17□□□□□ -1.74
SHG1YBR258C RAD53P22216 821 aa4.16□□□□□ -1.74
SHG1YBR258C PEX6P33760 1030 aa4.16□□□□□ -1.74
SHG1YBR258C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
SHG1YBR258C HXT16P47185 567 aa4.16□□□□□ -1.74
SHG1YBR258C PSP2P50109 593 aaKnown RBP4.16□□□□□ -1.74
SHG1YBR258C PBP1P53297 722 aaKnown RBP4.16□□□□□ -1.74
SHG1YBR258C NOG2P53742 486 aaKnown RBP4.16□□□□□ -1.74
SHG1YBR258C GCN5Q03330 439 aa4.16□□□□□ -1.74
SHG1YBR258C TPO1Q07824 586 aa4.16□□□□□ -1.74
SHG1YBR258C HMI1Q12039 706 aa4.16□□□□□ -1.74
SHG1YBR258C SOD2P00447 233 aa4.15□□□□□ -1.75
SHG1YBR258C PRP6P19735 899 aaPredicted RBP4.15□□□□□ -1.75
SHG1YBR258C GSY1P23337 708 aa4.15□□□□□ -1.75
SHG1YBR258C YEL1P34225 687 aa4.15□□□□□ -1.75
SHG1YBR258C TYS1P36421 394 aaKnown RBP4.15□□□□□ -1.75
SHG1YBR258C POA1P38218 177 aa4.15□□□□□ -1.75
SHG1YBR258C MET12P46151 657 aa4.15□□□□□ -1.75
SHG1YBR258C RIM8P53179 542 aa4.15□□□□□ -1.75
SHG1YBR258C YKR011CQ02209 353 aa4.15□□□□□ -1.75
SHG1YBR258C MET7Q08645 548 aa4.15□□□□□ -1.75
SHG1YBR258C NOP14Q99207 810 aaKnown RBP4.15□□□□□ -1.75
SHG1YBR258C PHR1P05066 565 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
SHG1YBR258C STE14P32584 239 aa4.14□□□□□ -1.75
SHG1YBR258C CAF16P43569 289 aa4.14□□□□□ -1.75
SHG1YBR258C CHA4P43634 648 aa4.14□□□□□ -1.75
SHG1YBR258C PRP43P53131 767 aaKnown RBP4.14□□□□□ -1.75
SHG1YBR258C VPS30Q02948 557 aa4.14□□□□□ -1.75
SHG1YBR258C COG8Q04632 607 aa4.14□□□□□ -1.75
SHG1YBR258C RSC3Q06639 885 aa4.14□□□□□ -1.75
SHG1YBR258C YLR001CQ07895 862 aa4.14□□□□□ -1.75
SHG1YBR258C NOP12Q08208 459 aaKnown RBP4.14□□□□□ -1.75
SHG1YBR258C GPB1Q08886 897 aa4.14□□□□□ -1.75
SHG1YBR258C YPL277CQ08989 487 aa4.14□□□□□ -1.75
SHG1YBR258C PDR5P33302 1511 aaKnown RBP4.13□□□□□ -1.75
SHG1YBR258C CDC9P04819 755 aa4.13□□□□□ -1.75
SHG1YBR258C RPS13P05756 151 aaKnown RBP4.13□□□□□ -1.75
SHG1YBR258C HIS5P07172 385 aa4.13□□□□□ -1.75
SHG1YBR258C ENA1P13587 1091 aa4.13□□□□□ -1.75
SHG1YBR258C GAS1P22146 559 aaKnown RBP4.13□□□□□ -1.75
SHG1YBR258C RFA1P22336 621 aaKnown RBP4.13□□□□□ -1.75
SHG1YBR258C VBA3P25594 458 aa4.13□□□□□ -1.75
SHG1YBR258C CDC20P26309 610 aa4.13□□□□□ -1.75
SHG1YBR258C TYE7P33122 291 aaPredicted RBP4.13□□□□□ -1.75
SHG1YBR258C MCD4P36051 919 aa4.13□□□□□ -1.75
SHG1YBR258C CTF8P38877 133 aa4.13□□□□□ -1.75
SHG1YBR258C TAD1P53065 400 aa4.13□□□□□ -1.75
SHG1YBR258C YGL081WP53156 320 aa4.13□□□□□ -1.75
SHG1YBR258C ENA2Q01896 1091 aa4.13□□□□□ -1.75
SHG1YBR258C ROT1Q03691 256 aa4.13□□□□□ -1.75
SHG1YBR258C YDR514CQ04408 483 aa4.13□□□□□ -1.75
SHG1YBR258C RXT3Q07458 294 aa4.13□□□□□ -1.75
SHG1YBR258C ACK1Q07622 623 aaPredicted RBP4.13□□□□□ -1.75
SHG1YBR258C YOR352WQ08816 343 aa4.13□□□□□ -1.75
SHG1YBR258C THI21Q08975 551 aa4.13□□□□□ -1.75
SHG1YBR258C UPC2Q12151 913 aa4.13□□□□□ -1.75
SHG1YBR258C ENA5Q12691 1091 aa4.13□□□□□ -1.75
SHG1YBR258C GLT1Q12680 2145 aaKnown RBP4.13□□□□□ -1.75
SHG1YBR258C YPR117WQ06116 2489 aa4.12□□□□□ -1.75
SHG1YBR258C SRD1P09007 221 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms