RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C NCL1P38205 684 aaKnown RBP4.34□□□□□ -1.71
PTA1YAL043C RRT2P38332 387 aa4.34□□□□□ -1.71
PTA1YAL043C THI6P41835 540 aa4.34□□□□□ -1.71
PTA1YAL043C FAR11P53917 953 aa4.34□□□□□ -1.71
PTA1YAL043C SEC5P89102 971 aa4.34□□□□□ -1.71
PTA1YAL043C TBF1Q02457 562 aa4.34□□□□□ -1.71
PTA1YAL043C TRM44Q02648 567 aaKnown RBP4.34□□□□□ -1.71
PTA1YAL043C YPL109CQ02981 657 aa4.34□□□□□ -1.71
PTA1YAL043C POB3Q04636 552 aaKnown RBP4.34□□□□□ -1.71
PTA1YAL043C ECI1Q05871 280 aa4.34□□□□□ -1.71
PTA1YAL043C SPO21Q12411 609 aa4.34□□□□□ -1.71
PTA1YAL043C ARP6Q12509 438 aa4.34□□□□□ -1.71
PTA1YAL043C FOB1O13329 566 aa4.34□□□□□ -1.72
PTA1YAL043C PMA1P05030 918 aaKnown RBP4.34□□□□□ -1.72
PTA1YAL043C SIT4P20604 311 aa4.34□□□□□ -1.72
PTA1YAL043C MLS1P30952 554 aa4.34□□□□□ -1.72
PTA1YAL043C NFU1P32860 256 aa4.34□□□□□ -1.72
PTA1YAL043C UBC6P33296 250 aaPredicted RBP4.34□□□□□ -1.72
PTA1YAL043C TIF5P38431 405 aaKnown RBP4.34□□□□□ -1.72
PTA1YAL043C AVT1P47082 602 aa4.34□□□□□ -1.72
PTA1YAL043C NUP42P49686 430 aaKnown RBP4.34□□□□□ -1.72
PTA1YAL043C LSB1P53281 241 aa4.34□□□□□ -1.72
PTA1YAL043C BTN2P53286 410 aa4.34□□□□□ -1.72
PTA1YAL043C DOS2P54858 310 aa4.34□□□□□ -1.72
PTA1YAL043C BUL2Q03758 920 aaKnown RBP4.34□□□□□ -1.72
PTA1YAL043C FAL1Q12099 399 aaKnown RBP4.34□□□□□ -1.72
PTA1YAL043C YLR462WO13556 202 aa4.33□□□□□ -1.72
PTA1YAL043C IME1P21190 360 aa4.33□□□□□ -1.72
PTA1YAL043C ESS1P22696 170 aa4.33□□□□□ -1.72
PTA1YAL043C GCD11P32481 527 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C YBL086CP38177 466 aa4.33□□□□□ -1.72
PTA1YAL043C YHL049CP38722 271 aa4.33□□□□□ -1.72
PTA1YAL043C YEL075CP39972 122 aa4.33□□□□□ -1.72
PTA1YAL043C YER189WP40104 122 aa4.33□□□□□ -1.72
PTA1YAL043C SMX2P40204 77 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C HOS4P40480 1083 aa4.33□□□□□ -1.72
PTA1YAL043C YFL064CP43540 174 aa4.33□□□□□ -1.72
PTA1YAL043C UBP6P43593 499 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C CLA4P48562 842 aa4.33□□□□□ -1.72
PTA1YAL043C NNF2P53253 936 aa4.33□□□□□ -1.72
PTA1YAL043C ARK1P53974 638 aa4.33□□□□□ -1.72
PTA1YAL043C UTP6Q02354 440 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C DUS4Q06063 367 aa4.33□□□□□ -1.72
PTA1YAL043C DAS2Q12084 232 aa4.33□□□□□ -1.72
PTA1YAL043C CFT2Q12102 859 aaPredicted RBP4.33□□□□□ -1.72
PTA1YAL043C RRG1Q12167 365 aaPredicted RBP4.33□□□□□ -1.72
PTA1YAL043C YBL111CQ3E7Y5 667 aa4.33□□□□□ -1.72
PTA1YAL043C TY1B-AO13527 1196 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C CMD1P06787 147 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C PYC1P11154 1178 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PTA1YAL043C DAL2P25335 343 aa4.33□□□□□ -1.72
PTA1YAL043C PDB1P32473 366 aaKnown RBP4.33□□□□□ -1.72
PTA1YAL043C FZO1P38297 855 aa4.33□□□□□ -1.72
PTA1YAL043C RSM26P47141 266 aa4.33□□□□□ -1.72
PTA1YAL043C ORC4P54791 529 aa4.33□□□□□ -1.72
PTA1YAL043C YMR074CQ04773 145 aa4.33□□□□□ -1.72
PTA1YAL043C CBF1P17106 351 aa4.32□□□□□ -1.72
PTA1YAL043C BAS1P22035 811 aa4.32□□□□□ -1.72
PTA1YAL043C GCG1P32656 232 aaKnown RBP4.32□□□□□ -1.72
PTA1YAL043C KTR2P33550 425 aa4.32□□□□□ -1.72
PTA1YAL043C TRZ1P36159 838 aaPredicted RBP4.32□□□□□ -1.72
PTA1YAL043C CST26P38226 397 aa4.32□□□□□ -1.72
PTA1YAL043C PFF1P38244 976 aa4.32□□□□□ -1.72
PTA1YAL043C SEC26P41810 973 aaKnown RBP4.32□□□□□ -1.72
PTA1YAL043C LEM3P42838 414 aa4.32□□□□□ -1.72
PTA1YAL043C NOG2P53742 486 aaKnown RBP4.32□□□□□ -1.72
PTA1YAL043C MFM1Q02783 413 aa4.32□□□□□ -1.72
PTA1YAL043C SND1Q04007 877 aa4.32□□□□□ -1.72
PTA1YAL043C YLR297WQ05899 129 aa4.32□□□□□ -1.72
PTA1YAL043C ALR1Q08269 859 aa4.32□□□□□ -1.72
PTA1YAL043C YPL277CQ08989 487 aa4.32□□□□□ -1.72
PTA1YAL043C PHR1P05066 565 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PTA1YAL043C CDC33P07260 213 aaKnown RBP4.32□□□□□ -1.72
PTA1YAL043C CLN3P13365 580 aa4.32□□□□□ -1.72
PTA1YAL043C PMR1P13586 950 aa4.32□□□□□ -1.72
PTA1YAL043C MGT1P26188 188 aa4.32□□□□□ -1.72
PTA1YAL043C HXT1P32465 570 aa4.32□□□□□ -1.72
PTA1YAL043C SSE1P32589 693 aaKnown RBP4.32□□□□□ -1.72
PTA1YAL043C MSG5P38590 489 aa4.32□□□□□ -1.72
PTA1YAL043C DAS1P47005 663 aa4.32□□□□□ -1.72
PTA1YAL043C ALY2P47029 1046 aa4.32□□□□□ -1.72
PTA1YAL043C SGM1P47166 707 aa4.32□□□□□ -1.72
PTA1YAL043C TIM8P57744 87 aa4.32□□□□□ -1.72
PTA1YAL043C RGA2Q06407 1009 aa4.32□□□□□ -1.72
PTA1YAL043C CRD1Q07560 283 aa4.32□□□□□ -1.72
PTA1YAL043C NOC3Q07896 663 aaPredicted RBP4.32□□□□□ -1.72
PTA1YAL043C MED1Q12321 566 aa4.32□□□□□ -1.72
PTA1YAL043C NKP1Q12493 238 aa4.32□□□□□ -1.72
PTA1YAL043C SEY1Q99287 776 aa4.32□□□□□ -1.72
PTA1YAL043C HPR1P17629 752 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C PUF4P25339 888 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PTA1YAL043C ILV6P25605 309 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C PAM1P37304 830 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C MRX3P38172 270 aa4.31□□□□□ -1.72
PTA1YAL043C VHC1P38329 1120 aa4.31□□□□□ -1.72
PTA1YAL043C PAN5P38787 379 aa4.31□□□□□ -1.72
PTA1YAL043C TIF4631P39935 952 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C RPT2P40327 437 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C SAP185P40856 1058 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms