RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TRIM27P14373 513 aa21.65■■□□□ 1.06
PHGDH-234ENST00000642041 COG6Q9Y2V7 657 aa21.65■■□□□ 1.06
PHGDH-234ENST00000642041 KDM3BQ7LBC6 1761 aa21.65■■□□□ 1.06
PHGDH-234ENST00000642041 SCN7AQ01118 1682 aa21.65■■□□□ 1.06
PHGDH-234ENST00000642041 IARSP41252 1262 aaKnown RBP21.64■■□□□ 1.05
PHGDH-234ENST00000642041 NPR1P16066 1061 aa21.63■■□□□ 1.05
PHGDH-234ENST00000642041 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
PHGDH-234ENST00000642041 LMOD1P29536 600 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-234ENST00000642041 TSPYL6Q8N831 410 aa21.62■■□□□ 1.05
PHGDH-234ENST00000642041 PANK1Q8TE04 598 aa21.62■■□□□ 1.05
PHGDH-234ENST00000642041 BCL2L13Q9BXK5 485 aa21.62■■□□□ 1.05
PHGDH-234ENST00000642041 TRAF5O00463 557 aa21.61■■□□□ 1.05
PHGDH-234ENST00000642041 IL6STP40189 918 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-234ENST00000642041 SAPCD2Q86UD0 394 aa21.61■■□□□ 1.05
PHGDH-234ENST00000642041 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
PHGDH-234ENST00000642041 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
PHGDH-234ENST00000642041 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-234ENST00000642041 CAMTA2O94983 1202 aa21.6■■□□□ 1.05
PHGDH-234ENST00000642041 OLFM4Q6UX06 510 aa21.6■■□□□ 1.05
PHGDH-234ENST00000642041 USP50Q70EL3 339 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-234ENST00000642041 JDP2Q8WYK2 163 aa21.6■■□□□ 1.05
PHGDH-234ENST00000642041 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-234ENST00000642041 EIF6P56537 245 aaKnown RBP21.59■■□□□ 1.05
PHGDH-234ENST00000642041 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
PHGDH-234ENST00000642041 TEX13AQ9BXU3 409 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-234ENST00000642041 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
PHGDH-234ENST00000642041 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
PHGDH-234ENST00000642041 ABCC4O15439 1325 aa21.58■■□□□ 1.05
PHGDH-234ENST00000642041 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-234ENST00000642041 EPS15P42566 896 aa21.58■■□□□ 1.05
PHGDH-234ENST00000642041 SCNN1DP51172 638 aa21.58■■□□□ 1.05
PHGDH-234ENST00000642041 SOX10P56693 466 aa21.58■■□□□ 1.05
PHGDH-234ENST00000642041 INTS3Q68E01 1043 aaKnown RBP21.58■■□□□ 1.05
PHGDH-234ENST00000642041 TTC5Q8N0Z6 440 aa21.58■■□□□ 1.05
PHGDH-234ENST00000642041 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
PHGDH-234ENST00000642041 NPM2Q86SE8 214 aaKnown RBP21.57■■□□□ 1.04
PHGDH-234ENST00000642041 PSMD1Q99460 953 aa21.57■■□□□ 1.04
PHGDH-234ENST00000642041 CCT4P50991 539 aaKnown RBP21.56■■□□□ 1.04
PHGDH-234ENST00000642041 HDAC1Q13547 482 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-234ENST00000642041 NBPF5PQ86XG9 351 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-234ENST00000642041 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
PHGDH-234ENST00000642041 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
PHGDH-234ENST00000642041 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
PHGDH-234ENST00000642041 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
PHGDH-234ENST00000642041 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
PHGDH-234ENST00000642041 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
PHGDH-234ENST00000642041 CELF2O95319 508 aaKnown RBP21.54■■□□□ 1.04
PHGDH-234ENST00000642041 RLBP1P12271 317 aa21.54■■□□□ 1.04
PHGDH-234ENST00000642041 ALDH1B1P30837 517 aa21.54■■□□□ 1.04
PHGDH-234ENST00000642041 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
PHGDH-234ENST00000642041 TMEM57Q8N5G2 664 aa21.53■■□□□ 1.04
PHGDH-234ENST00000642041 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
PHGDH-234ENST00000642041 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.04
PHGDH-234ENST00000642041 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
PHGDH-234ENST00000642041 BCORQ6W2J9 1755 aa21.51■■□□□ 1.03
PHGDH-234ENST00000642041 ZBTB7BO15156 539 aaPredicted RBP21.51■■□□□ 1.03
PHGDH-234ENST00000642041 A1BGP04217 495 aa21.51■■□□□ 1.03
PHGDH-234ENST00000642041 NOGQ13253 232 aa21.51■■□□□ 1.03
PHGDH-234ENST00000642041 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
PHGDH-234ENST00000642041 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
PHGDH-234ENST00000642041 FMNL2Q96PY5 1086 aa21.51■■□□□ 1.03
PHGDH-234ENST00000642041 DBF4Q9UBU7 674 aaPredicted RBP21.51■■□□□ 1.03
PHGDH-234ENST00000642041 COL4A5P29400 1685 aa21.5■■□□□ 1.03
PHGDH-234ENST00000642041 TPTE2Q6XPS3 522 aa21.5■■□□□ 1.03
PHGDH-234ENST00000642041 CC2D2BQ6DHV5 1058 aa21.49■■□□□ 1.03
PHGDH-234ENST00000642041 RPAP2Q8IXW5 612 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-234ENST00000642041 GCC1Q96CN9 775 aa21.49■■□□□ 1.03
PHGDH-234ENST00000642041 ADARB2Q9NS39 739 aaKnown RBP21.49■■□□□ 1.03
PHGDH-234ENST00000642041 ZIC5Q96T25 663 aa21.48■■□□□ 1.03
PHGDH-234ENST00000642041 LAMB4A4D0S4 1761 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 KCNQ3O43525 872 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 LARGE2Q8N3Y3 721 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 SAGE1Q9NXZ1 904 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 PGAP2Q9UHJ9 254 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
PHGDH-234ENST00000642041 GNAI3P08754 354 aa21.46■■□□□ 1.03
PHGDH-234ENST00000642041 FLIIQ13045 1269 aa21.46■■□□□ 1.03
PHGDH-234ENST00000642041 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
PHGDH-234ENST00000642041 GLIS2Q9BZE0 524 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-234ENST00000642041 GPRC5DQ9NZD1 345 aa21.46■■□□□ 1.03
PHGDH-234ENST00000642041 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
PHGDH-234ENST00000642041 SNRPA1P09661 255 aaKnown RBP21.45■■□□□ 1.02
PHGDH-234ENST00000642041 GRIPAP1Q4V328 841 aa21.45■■□□□ 1.02
PHGDH-234ENST00000642041 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
PHGDH-234ENST00000642041 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
PHGDH-234ENST00000642041 IBTKQ9P2D0 1353 aaPredicted RBP21.45■■□□□ 1.02
PHGDH-234ENST00000642041 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
PHGDH-234ENST00000642041 HMMRO75330 724 aa21.44■■□□□ 1.02
PHGDH-234ENST00000642041 FKBP5Q13451 457 aaPredicted RBP21.43■■□□□ 1.02
PHGDH-234ENST00000642041 ZNF408Q9H9D4 720 aa21.43■■□□□ 1.02
PHGDH-234ENST00000642041 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
PHGDH-234ENST00000642041 RGL2O15211 777 aa21.42■■□□□ 1.02
PHGDH-234ENST00000642041 NIM1KQ8IY84 436 aa21.42■■□□□ 1.02
PHGDH-234ENST00000642041 NBPF15Q8N660 670 aa21.42■■□□□ 1.02
PHGDH-234ENST00000642041 ZC3H15Q8WU90 426 aaKnown RBP21.42■■□□□ 1.02
PHGDH-234ENST00000642041 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
PHGDH-234ENST00000642041 HUNKP57058 714 aa21.41■■□□□ 1.02
PHGDH-234ENST00000642041 CRY2Q49AN0 593 aa21.41■■□□□ 1.02
PHGDH-234ENST00000642041 CDC37L1Q7L3B6 337 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 608.5 ms