RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
POLR2B-213ENST00000639658 GGA2Q9UJY4 613 aa6.6□□□□□ -1.35
POLR2B-213ENST00000639658 KDM2AQ9Y2K7 1162 aa6.6□□□□□ -1.35
POLR2B-213ENST00000639658 PIK3C2BO00750 1634 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 PLEKHD1A6NEE1 506 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 MYO1BO43795 1136 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 CASTP20810 708 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 PLCB4Q15147 1175 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 GTF3C6Q969F1 213 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 THUMPD2Q9BTF0 503 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 STK26Q9P289 416 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 CLIP2Q9UDT6 1046 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 STAP2Q9UGK3 403 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 RPS6KL1Q9Y6S9 549 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 DLG5Q8TDM6 1919 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 NRKQ7Z2Y5 1582 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 STX6O43752 255 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 RTN2O75298 545 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 HSPA4P34932 840 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 MAGEA8P43361 318 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 ETF1P62495 437 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 TRAF1Q13077 416 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 ERCC6LQ2NKX8 1250 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 ARHGAP29Q52LW3 1261 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 E4F1Q66K89 784 aaPredicted RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 YTHDF3Q7Z739 585 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 POTEDQ86YR6 584 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 FMNL3Q8IVF7 1028 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 FAM71BQ8TC56 605 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 PPP1R13BQ96KQ4 1090 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 CFAP53Q96M91 514 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 MPHOSPH8Q99549 860 aa6.59□□□□□ -1.35
POLR2B-213ENST00000639658 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.35
POLR2B-213ENST00000639658 SRRM3A6NNA2 597 aaPredicted RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 SMC2O95347 1197 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 MAP3K9P80192 1104 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 PREPLQ4J6C6 727 aaPredicted RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 PABPN1Q86U42 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 ANKRD18AQ8IVF6 992 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 DRC1Q96MC2 740 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 ESYT1Q9BSJ8 1104 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 GNL3LQ9NVN8 582 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 ETAA1Q9NY74 926 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 ANAPC4Q9UJX5 808 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 GOLGA6L9A6NEM1 432 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 USP27XA6NNY8 438 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 A6NNZ2 444 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 H0YHG0 523 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 GPTP24298 496 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 TMPOP42166 694 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 TUBB8Q3ZCM7 444 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 MROH1Q8NDA8 1641 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 CACNA1FO60840 1977 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 KDM6AO15550 1401 aaPredicted RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 SKILP12757 684 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 SRPK2P78362 688 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 APOBRQ0VD83 1088 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 DNAJC21Q5F1R6 531 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 C1QTNF12Q5T7M4 302 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 LRRC31Q6UY01 552 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 RTF1Q92541 710 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 TM6SF1Q9BZW5 370 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 API5Q9BZZ5 524 aaKnown RBP6.58□□□□□ -1.36
POLR2B-213ENST00000639658 NUP62CLQ9H1M0 184 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 CNPY2Q9Y2B0 182 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
POLR2B-213ENST00000639658 NPHP4O75161 1426 aaPredicted RBP6.57□□□□□ -1.36
POLR2B-213ENST00000639658 PXDNLA1KZ92 1463 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 ATP10BO94823 1461 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 CD163L1Q9NR16 1453 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 FSBPO95073 299 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 GCFC2P16383 781 aaKnown RBP6.57□□□□□ -1.36
POLR2B-213ENST00000639658 CDC37Q16543 378 aaPredicted RBP6.57□□□□□ -1.36
POLR2B-213ENST00000639658 SLC5A9Q2M3M2 681 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 GIMAP6Q6P9H5 292 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 KCNV1Q6PIU1 500 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 UBXN4Q92575 508 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 ARFGAP3Q9NP61 516 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 NRBP1Q9UHY1 535 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 MTMR6Q9Y217 621 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 ABCC1P33527 1531 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 DLC1Q96QB1 1528 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 TULP4Q9NRJ4 1543 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 ADCY9O60503 1353 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 ZEB2O60315 1214 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 NEDD9Q14511 834 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 KLHL23Q8NBE8 558 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 SH2B1Q9NRF2 756 aaPredicted RBP6.57□□□□□ -1.36
POLR2B-213ENST00000639658 SBNO1A3KN83 1393 aa6.57□□□□□ -1.36
POLR2B-213ENST00000639658 H3BQF6 201 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms