RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 WDR78Q5VTH9 848 aa17.13■□□□□ 0.33
UBE3A-227ENST00000638011 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
UBE3A-227ENST00000638011 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 PHLDB3Q6NSJ2 640 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 HOMEZQ8IX15 550 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 SYT1P21579 422 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 VPS52Q8N1B4 723 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 MSANTD4Q8NCY6 345 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 RPGRIP1Q96KN7 1286 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 EXOC1Q9NV70 894 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 RAD50Q92878 1312 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
UBE3A-227ENST00000638011 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
UBE3A-227ENST00000638011 ATL3Q6DD88 541 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 HAUS8Q9BT25 410 aa17.12■□□□□ 0.33
UBE3A-227ENST00000638011 ATP2C2O75185 946 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 DBN1Q16643 649 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 BICDL2A1A5D9 508 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 BMP2KLQ5H9B9 411 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-227ENST00000638011 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 GAS8O95995 478 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 TTC36A6NLP5 189 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 CALCOCO2Q13137 446 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 RNF8O76064 485 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
UBE3A-227ENST00000638011 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
UBE3A-227ENST00000638011 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 CETN3O15182 167 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-227ENST00000638011 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
UBE3A-227ENST00000638011 TRIM14Q14142 442 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.331e-10■□□□□ 11.3
UBE3A-227ENST00000638011 SLC12A7Q9Y666 1083 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 VIMP08670 466 aaKnown RBP17.1■□□□□ 0.33
UBE3A-227ENST00000638011 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-227ENST00000638011 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-227ENST00000638011 IFT20Q8IY31 132 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 CATIPQ7Z7H3 387 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 TRIM4Q9C037 500 aa17.1■□□□□ 0.33
UBE3A-227ENST00000638011 SDCCAG8Q86SQ7 713 aaPredicted RBP17.09■□□□□ 0.33
UBE3A-227ENST00000638011 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 CCDC63Q8NA47 563 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 RAB11FIP4Q86YS3 637 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 PSMA7O14818 248 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 CUL5Q93034 780 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 SYKP43405 635 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 UBA7P41226 1012 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 SELENOSQ9BQE4 189 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
UBE3A-227ENST00000638011 TBC1D2Q9BYX2 928 aa17.08■□□□□ 0.33
UBE3A-227ENST00000638011 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.08■□□□□ 0.33
UBE3A-227ENST00000638011 DNA2P51530 1060 aa17.08■□□□□ 0.33
UBE3A-227ENST00000638011 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 CAPZA3Q96KX2 299 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 ELP1O95163 1332 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 RPAINQ86UA6 219 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
UBE3A-227ENST00000638011 MYO1BO43795 1136 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 PDCD7Q8N8D1 485 aaKnown RBP17.08■□□□□ 0.32
UBE3A-227ENST00000638011 PPP1R2P41236 205 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBE3A-227ENST00000638011 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
UBE3A-227ENST00000638011 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 SATB1Q01826 763 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 EVI5O60447 810 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 KRT13P13646 458 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
UBE3A-227ENST00000638011 PDCD2Q16342 344 aaPredicted RBP17.07■□□□□ 0.32
UBE3A-227ENST00000638011 PPP2R5EQ16537 467 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 GKAP1Q5VSY0 366 aaPredicted RBP17.07■□□□□ 0.32
UBE3A-227ENST00000638011 GSTA5Q7RTV2 222 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 HIP1RO75146 1068 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 TACC3Q9Y6A5 838 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 MTHFSP49914 203 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 TRAF1Q13077 416 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms