RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 GIPC1O14908 333 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 U2SURPO15042 1029 aaKnown RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 PPP1R12BO60237 982 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 PEX14O75381 377 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 S100BP04271 92 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 SSBP05455 408 aaKnown RBP eCLIP3.42□□□□□ -1.86
ATRX-220ENST00000635865 CELA2BP08218 269 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 FURINP09958 794 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 PCSK2P16519 638 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 MZF1P28698 734 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 CHMP4BP1P59074 171 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 PAK2Q13177 524 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 ERFEQ4G0M1 354 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 COX20Q5RI15 118 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 C6orf118Q5T5N4 469 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 TMED8Q6PL24 325 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 BPHLQ86WA6 291 aaPredicted RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 SMC5Q8IY18 1101 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 TTC16Q8NEE8 873 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 TRIM52Q96A61 297 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 GPRASP2Q96D09 838 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 SLC10A4Q96EP9 437 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 SEC16BQ96JE7 1060 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 CSRNP1Q96S65 589 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 SRPK1Q96SB4 655 aaKnown RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 IRF2BPLQ9H1B7 796 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 SIRPGQ9P1W8 387 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 CDV3Q9UKY7 258 aaKnown RBP3.42□□□□□ -1.86
ATRX-220ENST00000635865 POLIQ9UNA4 740 aa3.42□□□□□ -1.86
ATRX-220ENST00000635865 CCDC194A0A1B0GVG4 234 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 PHF20L1A8MW92 1017 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 TMEM229AB2RXF0 380 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 ADAMTS2O95450 1211 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 PTSQ03393 145 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 DNM1Q05193 864 aaKnown RBP3.41□□□□□ -1.86
ATRX-220ENST00000635865 SERINC3Q13530 473 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 TAF1CQ15572 869 aaPredicted RBP3.41□□□□□ -1.86
ATRX-220ENST00000635865 PLEKHG6Q3KR16 790 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 PLEKHG4Q58EX7 1191 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 TAF7LQ5H9L4 462 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 SH3RF1Q7Z6J0 888 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 GJD3Q8N144 294 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 STAG2Q8N3U4 1231 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 RNPC3Q96LT9 517 aaKnown RBP3.41□□□□□ -1.86
ATRX-220ENST00000635865 TRIM55Q9BYV6 548 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 UNC93B1Q9H1C4 597 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 DNAJC25Q9H1X3 360 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 TSPAN10Q9H1Z9 355 aaPredicted RBP3.41□□□□□ -1.86
ATRX-220ENST00000635865 ZFAND3Q9H8U3 227 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 PRDM16Q9HAZ2 1276 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 DDX56Q9NY93 547 aaKnown RBP3.41□□□□□ -1.86
ATRX-220ENST00000635865 CHMP3Q9Y3E7 222 aa3.41□□□□□ -1.86
ATRX-220ENST00000635865 A0A1W2PRU2 124 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 HMGB1P1B2RPK0 211 aaPredicted RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 WASLO00401 505 aaPredicted RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 TNFRSF10BO14763 440 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 EIF3JO75822 258 aaKnown RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 GDF10P55107 478 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 LRP10Q7Z4F1 713 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 ATCAYQ86WG3 371 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 CCDC155Q8N6L0 562 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 RASGRP4Q8TDF6 673 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 C2orf49Q9BVC5 232 aaPredicted RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 CFHR5Q9BXR6 569 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 PCGF6Q9BYE7 350 aa3.4□□□□□ -1.87
ATRX-220ENST00000635865 GEMIN8Q9NWZ8 242 aaKnown RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 BCCIPQ9P287 314 aaKnown RBP eCLIP3.4□□□□□ -1.87
ATRX-220ENST00000635865 G3BP2Q9UN86 482 aaKnown RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 R3HCC1Q9Y3T6 440 aaKnown RBP3.4□□□□□ -1.87
ATRX-220ENST00000635865 SLC35F4A4IF30 521 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 KRBA1A5PL33 1030 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 EIF1AYO14602 144 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 ZBTB39O15060 712 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 CDC45O75419 566 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 ZIC2O95409 532 aaPredicted RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 PDGFAP04085 211 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 INHAP05111 366 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 RPLP1P05386 114 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 ST13P50502 369 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 SRSF11Q05519 484 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.39□□□□□ -1.874e-7■■■□□ 17.8
ATRX-220ENST00000635865 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATRX-220ENST00000635865 ARSHQ5FYA8 562 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 ANKS3Q6ZW76 656 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 RPUSD2Q8IZ73 545 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 LINC00528Q8N1L1 170 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 MEIOBQ8N635 442 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 BEND7Q8N7W2 519 aaPredicted RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 BAP1Q92560 729 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 EDEM1Q92611 657 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 ITPKCQ96DU7 683 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 MYO19Q96H55 970 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 SLC4A9Q96Q91 983 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 C12orf49Q9H741 205 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 ZNF408Q9H9D4 720 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 GOLGA2P5Q9HBQ8 144 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 TYW1Q9NV66 732 aaKnown RBP3.39□□□□□ -1.87
ATRX-220ENST00000635865 SERTAD1Q9UHV2 236 aa3.39□□□□□ -1.87
ATRX-220ENST00000635865 CPNE3O75131 537 aaKnown RBP3.38□□□□□ -1.87
ATRX-220ENST00000635865 PDGFRBP09619 1106 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms