RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 PKN2Q16513 984 aaKnown RBP15.98■□□□□ 0.15
CHD2-218ENST00000629346 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 MCM10Q7L590 875 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 MPNDQ8N594 471 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
CHD2-218ENST00000629346 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
CHD2-218ENST00000629346 ZBTB3Q9H5J0 574 aa15.98■□□□□ 0.15
CHD2-218ENST00000629346 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
CHD2-218ENST00000629346 TBC1D8O95759 1140 aa15.97■□□□□ 0.15
CHD2-218ENST00000629346 EGFRP00533 1210 aa15.97■□□□□ 0.15
CHD2-218ENST00000629346 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
CHD2-218ENST00000629346 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
CHD2-218ENST00000629346 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
CHD2-218ENST00000629346 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
CHD2-218ENST00000629346 MAP3K15Q6ZN16 1313 aa15.96■□□□□ 0.15
CHD2-218ENST00000629346 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHD2-218ENST00000629346 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
CHD2-218ENST00000629346 ZNF296Q8WUU4 475 aaPredicted RBP15.96■□□□□ 0.15
CHD2-218ENST00000629346 ABCC4O15439 1325 aa15.95■□□□□ 0.14
CHD2-218ENST00000629346 NTSR2O95665 410 aa15.95■□□□□ 0.14
CHD2-218ENST00000629346 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
CHD2-218ENST00000629346 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
CHD2-218ENST00000629346 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CHD2-218ENST00000629346 PSMD14O00487 310 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 MYL6BP14649 208 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 RASAL3Q86YV0 1011 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 SP8Q8IXZ3 490 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 NUP98P52948 1817 aa15.94■□□□□ 0.14
CHD2-218ENST00000629346 IBTKQ9P2D0 1353 aaPredicted RBP15.93■□□□□ 0.14
CHD2-218ENST00000629346 BBOX1O75936 387 aa15.93■□□□□ 0.14
CHD2-218ENST00000629346 FBXO46Q6PJ61 603 aaPredicted RBP15.93■□□□□ 0.14
CHD2-218ENST00000629346 PPP1R42Q7Z4L9 355 aa15.93■□□□□ 0.14
CHD2-218ENST00000629346 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
CHD2-218ENST00000629346 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
CHD2-218ENST00000629346 CCER1Q8TC90 406 aaPredicted RBP15.93■□□□□ 0.14
CHD2-218ENST00000629346 DPF2Q92785 391 aa15.93■□□□□ 0.14
CHD2-218ENST00000629346 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
CHD2-218ENST00000629346 FXR1P51114 621 aaKnown RBP eCLIP15.92■□□□□ 0.14
CHD2-218ENST00000629346 SULF1Q8IWU6 871 aa15.92■□□□□ 0.14
CHD2-218ENST00000629346 DBNDD1Q9H9R9 158 aa15.92■□□□□ 0.14
CHD2-218ENST00000629346 CDCA5Q96FF9 252 aa15.91■□□□□ 0.14
CHD2-218ENST00000629346 GGA3Q9NZ52 723 aa15.91■□□□□ 0.14
CHD2-218ENST00000629346 ASTN2O75129 1339 aaPredicted RBP15.91■□□□□ 0.14
CHD2-218ENST00000629346 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
CHD2-218ENST00000629346 GPR25O00155 361 aa15.9■□□□□ 0.14
CHD2-218ENST00000629346 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
CHD2-218ENST00000629346 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
CHD2-218ENST00000629346 KIF4BQ2VIQ3 1234 aa15.89■□□□□ 0.13
CHD2-218ENST00000629346 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
CHD2-218ENST00000629346 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
CHD2-218ENST00000629346 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.13
CHD2-218ENST00000629346 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
CHD2-218ENST00000629346 POTEFA5A3E0 1075 aa15.88■□□□□ 0.13
CHD2-218ENST00000629346 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
CHD2-218ENST00000629346 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
CHD2-218ENST00000629346 WASHC4Q2M389 1173 aa15.88■□□□□ 0.13
CHD2-218ENST00000629346 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
CHD2-218ENST00000629346 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
CHD2-218ENST00000629346 MKI67P46013 3256 aaKnown RBP15.87■□□□□ 0.13
CHD2-218ENST00000629346 MKRN3Q13064 507 aaKnown RBP15.87■□□□□ 0.13
CHD2-218ENST00000629346 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
CHD2-218ENST00000629346 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
CHD2-218ENST00000629346 UBE2Q2LH0YL09 131 aa15.86■□□□□ 0.13
CHD2-218ENST00000629346 C6orf229H3BNL8 230 aa15.86■□□□□ 0.13
CHD2-218ENST00000629346 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
CHD2-218ENST00000629346 GRAPQ13588 217 aa15.86■□□□□ 0.13
CHD2-218ENST00000629346 ANGEL2Q5VTE6 544 aaKnown RBP15.86■□□□□ 0.13
CHD2-218ENST00000629346 GRAPLQ8TC17 118 aaPredicted RBP15.86■□□□□ 0.13
CHD2-218ENST00000629346 NSFL1CQ9UNZ2 370 aaKnown RBP15.86■□□□□ 0.13
CHD2-218ENST00000629346 ECE2O60344 883 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 FKTNO75072 461 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 ZNF428Q96B54 188 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 SCAF8Q9UPN6 1271 aaKnown RBP15.85■□□□□ 0.13
CHD2-218ENST00000629346 RTL9Q8NET4 1388 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
CHD2-218ENST00000629346 DUOX1Q9NRD9 1551 aa15.84■□□□□ 0.13
CHD2-218ENST00000629346 SCARF1Q14162 830 aa15.84■□□□□ 0.13
CHD2-218ENST00000629346 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
CHD2-218ENST00000629346 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
CHD2-218ENST00000629346 PER1O15534 1290 aaPredicted RBP15.83■□□□□ 0.12
CHD2-218ENST00000629346 TM4SF4P48230 202 aa15.83■□□□□ 0.12
CHD2-218ENST00000629346 FKBP1BP68106 108 aa15.83■□□□□ 0.12
CHD2-218ENST00000629346 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
CHD2-218ENST00000629346 PRAMEF18Q5VWM3 479 aa15.83■□□□□ 0.12
CHD2-218ENST00000629346 TAF1P21675 1872 aa15.82■□□□□ 0.12
CHD2-218ENST00000629346 DLL1O00548 723 aa15.82■□□□□ 0.12
CHD2-218ENST00000629346 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
CHD2-218ENST00000629346 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHD2-218ENST00000629346 NOM1Q5C9Z4 860 aaKnown RBP15.82■□□□□ 0.12
CHD2-218ENST00000629346 POLLQ9UGP5 575 aa15.82■□□□□ 0.12
CHD2-218ENST00000629346 TRIM17Q9Y577 477 aa15.82■□□□□ 0.12
CHD2-218ENST00000629346 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
CHD2-218ENST00000629346 EN2P19622 333 aaPredicted RBP15.81■□□□□ 0.12
CHD2-218ENST00000629346 LAMB2P55268 1798 aa15.81■□□□□ 0.12
CHD2-218ENST00000629346 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
CHD2-218ENST00000629346 TRMT112Q9UI30 125 aaKnown RBP15.81■□□□□ 0.12
CHD2-218ENST00000629346 G3V3G9 751 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms